fast.genomicscompare 6,575 genera of bacteria & archaea

 

Youxingia wuxianensis NSJ-64

Genome identifier: GCF_014385085.1

NCBI assembly name: ASM1438508v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, Youxingia, Youxingia wuxianensis

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Youxingia, Youxingia wuxianensis

Scaffolds: 34

Genes: 2,731 Protein-coding: 2,629 RNAs: 58 pseudogenes: 44

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACRTD010000001.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg01, whole genome shotgun sequence 446,317
NZ_JACRTD010000002.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg02, whole genome shotgun sequence 391,530
NZ_JACRTD010000003.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg03, whole genome shotgun sequence 366,436
NZ_JACRTD010000004.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg04, whole genome shotgun sequence 305,551
NZ_JACRTD010000005.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg05, whole genome shotgun sequence 221,636
NZ_JACRTD010000006.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg06, whole genome shotgun sequence 201,596
NZ_JACRTD010000007.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg07, whole genome shotgun sequence 160,098
NZ_JACRTD010000008.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg08, whole genome shotgun sequence 152,516
NZ_JACRTD010000009.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg09, whole genome shotgun sequence 111,040
NZ_JACRTD010000010.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg10, whole genome shotgun sequence 68,276
NZ_JACRTD010000011.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg11, whole genome shotgun sequence 62,259
NZ_JACRTD010000012.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg12, whole genome shotgun sequence 40,838
NZ_JACRTD010000013.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg13, whole genome shotgun sequence 39,535
NZ_JACRTD010000014.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg14, whole genome shotgun sequence 34,260
NZ_JACRTD010000015.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg15, whole genome shotgun sequence 7,410
NZ_JACRTD010000016.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg16, whole genome shotgun sequence 7,189
NZ_JACRTD010000017.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg17, whole genome shotgun sequence 6,993
NZ_JACRTD010000018.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg18, whole genome shotgun sequence 6,794
NZ_JACRTD010000019.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg19, whole genome shotgun sequence 5,236
NZ_JACRTD010000020.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg20, whole genome shotgun sequence 3,269
NZ_JACRTD010000021.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg21, whole genome shotgun sequence 2,914
NZ_JACRTD010000022.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg22, whole genome shotgun sequence 2,797
NZ_JACRTD010000023.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg23, whole genome shotgun sequence 2,702
NZ_JACRTD010000024.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg24, whole genome shotgun sequence 2,663
NZ_JACRTD010000025.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg25, whole genome shotgun sequence 1,730
NZ_JACRTD010000026.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg26, whole genome shotgun sequence 1,529
NZ_JACRTD010000027.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg27, whole genome shotgun sequence 1,522
NZ_JACRTD010000028.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg28, whole genome shotgun sequence 1,133
NZ_JACRTD010000029.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg29, whole genome shotgun sequence 1,026
NZ_JACRTD010000030.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg30, whole genome shotgun sequence 1,015
NZ_JACRTD010000031.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg31, whole genome shotgun sequence 976
NZ_JACRTD010000032.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg32, whole genome shotgun sequence 745
NZ_JACRTD010000033.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg33, whole genome shotgun sequence 665
NZ_JACRTD010000034.1 Youxingia wuxianensis strain NSJ-64 D7.49_ctg34, whole genome shotgun sequence 541

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory