fast.genomicscompare 6,575 genera of bacteria & archaea

 

Ochrobactrum_A sp014397025 Marseille-Q0166

Genome identifier: GCF_014397025.1

NCBI assembly name: ASM1439702v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Ochrobactrum_A, Ochrobactrum_A sp014397025

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Brucellaceae, Ochrobactrum

Scaffolds: 3

Genes: 4,259 Protein-coding: 4,001 RNAs: 82 pseudogenes: 176

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACJUO010000001.1 Ochrobactrum sp. Marseille-Q0166 NODE_1_length_2314394_cov_42.7502, whole genome shotgun sequence 2,314,394
NZ_JACJUO010000002.1 Ochrobactrum sp. Marseille-Q0166 NODE_2_length_1556001_cov_42.5814, whole genome shotgun sequence 1,556,001
NZ_JACJUO010000003.1 Ochrobactrum sp. Marseille-Q0166 NODE_3_length_570981_cov_46.2611, whole genome shotgun sequence 570,981

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory