fast.genomicscompare 6,575 genera of bacteria & archaea

 

Oryzicola mucosus ROOL2

Genome identifier: GCF_014534685.1

NCBI assembly name: ASM1453468v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Oryzicola, Oryzicola mucosus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Phyllobacteriaceae, Oryzicola, Oryzicola mucosus

Scaffolds: 28

Genes: 4,703 Protein-coding: 4,569 RNAs: 57 pseudogenes: 77

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACVVX010000001.1 Oryzicola mucosus strain ROOL2 contig1, whole genome shotgun sequence 1,354,450
NZ_JACVVX010000002.1 Oryzicola mucosus strain ROOL2 contig2, whole genome shotgun sequence 806,771
NZ_JACVVX010000003.1 Oryzicola mucosus strain ROOL2 contig3, whole genome shotgun sequence 656,326
NZ_JACVVX010000004.1 Oryzicola mucosus strain ROOL2 contig4, whole genome shotgun sequence 517,737
NZ_JACVVX010000005.1 Oryzicola mucosus strain ROOL2 contig5, whole genome shotgun sequence 383,181
NZ_JACVVX010000006.1 Oryzicola mucosus strain ROOL2 contig6, whole genome shotgun sequence 230,920
NZ_JACVVX010000007.1 Oryzicola mucosus strain ROOL2 contig7, whole genome shotgun sequence 175,594
NZ_JACVVX010000008.1 Oryzicola mucosus strain ROOL2 contig8, whole genome shotgun sequence 170,539
NZ_JACVVX010000009.1 Oryzicola mucosus strain ROOL2 contig9, whole genome shotgun sequence 136,140
NZ_JACVVX010000010.1 Oryzicola mucosus strain ROOL2 contig10, whole genome shotgun sequence 93,571
NZ_JACVVX010000011.1 Oryzicola mucosus strain ROOL2 contig11, whole genome shotgun sequence 71,898
NZ_JACVVX010000012.1 Oryzicola mucosus strain ROOL2 contig12, whole genome shotgun sequence 66,419
NZ_JACVVX010000013.1 Oryzicola mucosus strain ROOL2 contig13, whole genome shotgun sequence 52,919
NZ_JACVVX010000014.1 Oryzicola mucosus strain ROOL2 contig14, whole genome shotgun sequence 44,217
NZ_JACVVX010000015.1 Oryzicola mucosus strain ROOL2 contig15, whole genome shotgun sequence 29,713
NZ_JACVVX010000016.1 Oryzicola mucosus strain ROOL2 contig16, whole genome shotgun sequence 29,509
NZ_JACVVX010000017.1 Oryzicola mucosus strain ROOL2 contig17, whole genome shotgun sequence 24,227
NZ_JACVVX010000018.1 Oryzicola mucosus strain ROOL2 contig18, whole genome shotgun sequence 17,891
NZ_JACVVX010000019.1 Oryzicola mucosus strain ROOL2 contig19, whole genome shotgun sequence 8,630
NZ_JACVVX010000020.1 Oryzicola mucosus strain ROOL2 contig20, whole genome shotgun sequence 6,488
NZ_JACVVX010000021.1 Oryzicola mucosus strain ROOL2 contig21, whole genome shotgun sequence 5,795
NZ_JACVVX010000022.1 Oryzicola mucosus strain ROOL2 contig22, whole genome shotgun sequence 2,933
NZ_JACVVX010000023.1 Oryzicola mucosus strain ROOL2 contig23, whole genome shotgun sequence 2,001
NZ_JACVVX010000024.1 Oryzicola mucosus strain ROOL2 contig24, whole genome shotgun sequence 1,470
NZ_JACVVX010000025.1 Oryzicola mucosus strain ROOL2 contig25, whole genome shotgun sequence 1,425
NZ_JACVVX010000026.1 Oryzicola mucosus strain ROOL2 contig26, whole genome shotgun sequence 1,397
NZ_JACVVX010000027.1 Oryzicola mucosus strain ROOL2 contig27, whole genome shotgun sequence 1,245
NZ_JACVVX010000028.1 Oryzicola mucosus strain ROOL2 contig28, whole genome shotgun sequence 1,177

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory