fast.genomicscompare 6,575 genera of bacteria & archaea

 

Agaricicola taiwanensis CCM 7684

Genome identifier: GCF_014635245.1

NCBI assembly name: ASM1463524v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Methylopilaceae, Agaricicola, Agaricicola taiwanensis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Agaricicola, Agaricicola taiwanensis

Scaffolds: 17

Genes: 3,632 Protein-coding: 3,562 RNAs: 52 pseudogenes: 18

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_BMCP01000001.1 Agaricicola taiwanensis strain CCM 7684 sequence01, whole genome shotgun sequence 1,527,800
NZ_BMCP01000002.1 Agaricicola taiwanensis strain CCM 7684 sequence02, whole genome shotgun sequence 1,248,194
NZ_BMCP01000003.1 Agaricicola taiwanensis strain CCM 7684 sequence03, whole genome shotgun sequence 206,530
NZ_BMCP01000004.1 Agaricicola taiwanensis strain CCM 7684 sequence04, whole genome shotgun sequence 199,562
NZ_BMCP01000005.1 Agaricicola taiwanensis strain CCM 7684 sequence05, whole genome shotgun sequence 173,681
NZ_BMCP01000006.1 Agaricicola taiwanensis strain CCM 7684 sequence06, whole genome shotgun sequence 114,430
NZ_BMCP01000007.1 Agaricicola taiwanensis strain CCM 7684 sequence07, whole genome shotgun sequence 108,276
NZ_BMCP01000008.1 Agaricicola taiwanensis strain CCM 7684 sequence08, whole genome shotgun sequence 57,662
NZ_BMCP01000009.1 Agaricicola taiwanensis strain CCM 7684 sequence09, whole genome shotgun sequence 39,848
NZ_BMCP01000010.1 Agaricicola taiwanensis strain CCM 7684 sequence10, whole genome shotgun sequence 28,917
NZ_BMCP01000011.1 Agaricicola taiwanensis strain CCM 7684 sequence11, whole genome shotgun sequence 16,860
NZ_BMCP01000012.1 Agaricicola taiwanensis strain CCM 7684 sequence12, whole genome shotgun sequence 11,821
NZ_BMCP01000013.1 Agaricicola taiwanensis strain CCM 7684 sequence13, whole genome shotgun sequence 7,731
NZ_BMCP01000014.1 Agaricicola taiwanensis strain CCM 7684 sequence14, whole genome shotgun sequence 7,200
NZ_BMCP01000015.1 Agaricicola taiwanensis strain CCM 7684 sequence15, whole genome shotgun sequence 5,621
NZ_BMCP01000016.1 Agaricicola taiwanensis strain CCM 7684 sequence16, whole genome shotgun sequence 4,981
NZ_BMCP01000017.1 Agaricicola taiwanensis strain CCM 7684 sequence17, whole genome shotgun sequence 1,267

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory