fast.genomicscompare 6,575 genera of bacteria & archaea

 

Alsobacter metallidurans CGMCC 1.12214

Genome identifier: GCF_014636935.1

NCBI assembly name: ASM1463693v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Beijerinckiaceae, Alsobacter, Alsobacter metallidurans

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Alsobacteraceae, Alsobacter, Alsobacter metallidurans

Scaffolds: 8

Genes: 4,746 Protein-coding: 4,645 RNAs: 62 pseudogenes: 39

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_BMES01000001.1 Alsobacter metallidurans strain CGMCC 1.12214 sequence1, whole genome shotgun sequence 2,272,380
NZ_BMES01000002.1 Alsobacter metallidurans strain CGMCC 1.12214 sequence2, whole genome shotgun sequence 2,245,067
NZ_BMES01000003.1 Alsobacter metallidurans strain CGMCC 1.12214 sequence3, whole genome shotgun sequence 558,976
NZ_BMES01000004.1 Alsobacter metallidurans strain CGMCC 1.12214 sequence4, whole genome shotgun sequence 2,393
NZ_BMES01000005.1 Alsobacter metallidurans strain CGMCC 1.12214 sequence5, whole genome shotgun sequence 1,502
NZ_BMES01000006.1 Alsobacter metallidurans strain CGMCC 1.12214 sequence6, whole genome shotgun sequence 982
NZ_BMES01000007.1 Alsobacter metallidurans strain CGMCC 1.12214 sequence7, whole genome shotgun sequence 736
NZ_BMES01000008.1 Alsobacter metallidurans strain CGMCC 1.12214 sequence8, whole genome shotgun sequence 609

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory