fast.genomicscompare 6,575 genera of bacteria & archaea

 

Sinisalibacter lacisalsi CGMCC 1.12922

Genome identifier: GCF_014640115.1

NCBI assembly name: ASM1464011v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Sinisalibacter, Sinisalibacter lacisalsi

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Sinisalibacter, Sinisalibacter lacisalsi

Scaffolds: 28

Genes: 3,531 Protein-coding: 3,464 RNAs: 50 pseudogenes: 17

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_BMGI01000001.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence01, whole genome shotgun sequence 1,173,732
NZ_BMGI01000002.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence02, whole genome shotgun sequence 766,287
NZ_BMGI01000003.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence03, whole genome shotgun sequence 514,171
NZ_BMGI01000004.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence04, whole genome shotgun sequence 418,242
NZ_BMGI01000005.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence05, whole genome shotgun sequence 371,976
NZ_BMGI01000006.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence06, whole genome shotgun sequence 369,543
NZ_BMGI01000007.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence07, whole genome shotgun sequence 4,314
NZ_BMGI01000008.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence08, whole genome shotgun sequence 3,157
NZ_BMGI01000009.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence09, whole genome shotgun sequence 2,704
NZ_BMGI01000010.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence10, whole genome shotgun sequence 2,450
NZ_BMGI01000011.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence11, whole genome shotgun sequence 2,329
NZ_BMGI01000012.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence12, whole genome shotgun sequence 2,079
NZ_BMGI01000013.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence13, whole genome shotgun sequence 2,007
NZ_BMGI01000014.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence14, whole genome shotgun sequence 1,807
NZ_BMGI01000015.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence15, whole genome shotgun sequence 1,601
NZ_BMGI01000016.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence16, whole genome shotgun sequence 1,509
NZ_BMGI01000017.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence17, whole genome shotgun sequence 1,389
NZ_BMGI01000018.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence18, whole genome shotgun sequence 1,048
NZ_BMGI01000019.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence19, whole genome shotgun sequence 991
NZ_BMGI01000020.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence20, whole genome shotgun sequence 974
NZ_BMGI01000021.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence21, whole genome shotgun sequence 960
NZ_BMGI01000022.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence22, whole genome shotgun sequence 884
NZ_BMGI01000023.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence23, whole genome shotgun sequence 841
NZ_BMGI01000024.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence24, whole genome shotgun sequence 783
NZ_BMGI01000025.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence25, whole genome shotgun sequence 727
NZ_BMGI01000026.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence26, whole genome shotgun sequence 624
NZ_BMGI01000027.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence27, whole genome shotgun sequence 568
NZ_BMGI01000028.1 Sinisalibacter lacisalsi strain CGMCC 1.12922 sequence28, whole genome shotgun sequence 527

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory