fast.genomicscompare 6,575 genera of bacteria & archaea

 

Caldovatus sediminis CGMCC 1.16330

Genome identifier: GCF_014644455.1

NCBI assembly name: ASM1464445v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Acetobacterales, Acetobacteraceae, Caldovatus, Caldovatus sediminis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Acetobacteraceae, Caldovatus, Caldovatus sediminis

Scaffolds: 43

Genes: 4,457 Protein-coding: 4,358 RNAs: 50 pseudogenes: 49

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_BMKS01000001.1 Caldovatus sediminis strain CGMCC 1.16330 sequence01, whole genome shotgun sequence 618,334
NZ_BMKS01000002.1 Caldovatus sediminis strain CGMCC 1.16330 sequence02, whole genome shotgun sequence 537,449
NZ_BMKS01000003.1 Caldovatus sediminis strain CGMCC 1.16330 sequence03, whole genome shotgun sequence 464,232
NZ_BMKS01000004.1 Caldovatus sediminis strain CGMCC 1.16330 sequence04, whole genome shotgun sequence 449,093
NZ_BMKS01000005.1 Caldovatus sediminis strain CGMCC 1.16330 sequence05, whole genome shotgun sequence 364,442
NZ_BMKS01000006.1 Caldovatus sediminis strain CGMCC 1.16330 sequence06, whole genome shotgun sequence 351,407
NZ_BMKS01000007.1 Caldovatus sediminis strain CGMCC 1.16330 sequence07, whole genome shotgun sequence 206,727
NZ_BMKS01000008.1 Caldovatus sediminis strain CGMCC 1.16330 sequence08, whole genome shotgun sequence 183,659
NZ_BMKS01000009.1 Caldovatus sediminis strain CGMCC 1.16330 sequence09, whole genome shotgun sequence 156,430
NZ_BMKS01000010.1 Caldovatus sediminis strain CGMCC 1.16330 sequence10, whole genome shotgun sequence 154,808
NZ_BMKS01000011.1 Caldovatus sediminis strain CGMCC 1.16330 sequence11, whole genome shotgun sequence 137,920
NZ_BMKS01000012.1 Caldovatus sediminis strain CGMCC 1.16330 sequence12, whole genome shotgun sequence 129,815
NZ_BMKS01000013.1 Caldovatus sediminis strain CGMCC 1.16330 sequence13, whole genome shotgun sequence 121,742
NZ_BMKS01000014.1 Caldovatus sediminis strain CGMCC 1.16330 sequence14, whole genome shotgun sequence 112,279
NZ_BMKS01000015.1 Caldovatus sediminis strain CGMCC 1.16330 sequence15, whole genome shotgun sequence 100,096
NZ_BMKS01000016.1 Caldovatus sediminis strain CGMCC 1.16330 sequence16, whole genome shotgun sequence 90,253
NZ_BMKS01000017.1 Caldovatus sediminis strain CGMCC 1.16330 sequence17, whole genome shotgun sequence 87,192
NZ_BMKS01000018.1 Caldovatus sediminis strain CGMCC 1.16330 sequence18, whole genome shotgun sequence 79,652
NZ_BMKS01000019.1 Caldovatus sediminis strain CGMCC 1.16330 sequence19, whole genome shotgun sequence 59,391
NZ_BMKS01000020.1 Caldovatus sediminis strain CGMCC 1.16330 sequence20, whole genome shotgun sequence 50,076
NZ_BMKS01000021.1 Caldovatus sediminis strain CGMCC 1.16330 sequence21, whole genome shotgun sequence 49,927
NZ_BMKS01000022.1 Caldovatus sediminis strain CGMCC 1.16330 sequence22, whole genome shotgun sequence 46,016
NZ_BMKS01000023.1 Caldovatus sediminis strain CGMCC 1.16330 sequence23, whole genome shotgun sequence 43,390
NZ_BMKS01000024.1 Caldovatus sediminis strain CGMCC 1.16330 sequence24, whole genome shotgun sequence 40,888
NZ_BMKS01000025.1 Caldovatus sediminis strain CGMCC 1.16330 sequence25, whole genome shotgun sequence 37,373
NZ_BMKS01000026.1 Caldovatus sediminis strain CGMCC 1.16330 sequence26, whole genome shotgun sequence 24,278
NZ_BMKS01000027.1 Caldovatus sediminis strain CGMCC 1.16330 sequence27, whole genome shotgun sequence 19,399
NZ_BMKS01000028.1 Caldovatus sediminis strain CGMCC 1.16330 sequence28, whole genome shotgun sequence 18,842
NZ_BMKS01000029.1 Caldovatus sediminis strain CGMCC 1.16330 sequence29, whole genome shotgun sequence 16,473
NZ_BMKS01000030.1 Caldovatus sediminis strain CGMCC 1.16330 sequence30, whole genome shotgun sequence 9,428
NZ_BMKS01000031.1 Caldovatus sediminis strain CGMCC 1.16330 sequence31, whole genome shotgun sequence 6,728
NZ_BMKS01000032.1 Caldovatus sediminis strain CGMCC 1.16330 sequence32, whole genome shotgun sequence 5,800
NZ_BMKS01000033.1 Caldovatus sediminis strain CGMCC 1.16330 sequence33, whole genome shotgun sequence 5,710
NZ_BMKS01000034.1 Caldovatus sediminis strain CGMCC 1.16330 sequence34, whole genome shotgun sequence 4,590
NZ_BMKS01000035.1 Caldovatus sediminis strain CGMCC 1.16330 sequence35, whole genome shotgun sequence 3,706
NZ_BMKS01000036.1 Caldovatus sediminis strain CGMCC 1.16330 sequence36, whole genome shotgun sequence 2,755
NZ_BMKS01000037.1 Caldovatus sediminis strain CGMCC 1.16330 sequence37, whole genome shotgun sequence 1,451
NZ_BMKS01000038.1 Caldovatus sediminis strain CGMCC 1.16330 sequence38, whole genome shotgun sequence 1,363
NZ_BMKS01000039.1 Caldovatus sediminis strain CGMCC 1.16330 sequence39, whole genome shotgun sequence 1,074
NZ_BMKS01000040.1 Caldovatus sediminis strain CGMCC 1.16330 sequence40, whole genome shotgun sequence 841
NZ_BMKS01000041.1 Caldovatus sediminis strain CGMCC 1.16330 sequence41, whole genome shotgun sequence 682
NZ_BMKS01000042.1 Caldovatus sediminis strain CGMCC 1.16330 sequence42, whole genome shotgun sequence 674
NZ_BMKS01000043.1 Caldovatus sediminis strain CGMCC 1.16330 sequence43, whole genome shotgun sequence 615

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory