fast.genomicscompare 6,575 genera of bacteria & archaea

 

Iodidimonas muriae JCM 17843

Genome identifier: GCF_014647255.1

NCBI assembly name: ASM1464725v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Rhodothalassiaceae, Iodidimonas, Iodidimonas muriae

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Iodidimonadales, Iodidimonadaceae, Iodidimonas, Iodidimonas muriae

Scaffolds: 25

Genes: 2,805 Protein-coding: 2,736 RNAs: 52 pseudogenes: 17

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_BMOV01000001.1 Iodidimonas muriae strain JCM 17843 sequence01, whole genome shotgun sequence 560,831
NZ_BMOV01000002.1 Iodidimonas muriae strain JCM 17843 sequence02, whole genome shotgun sequence 522,893
NZ_BMOV01000003.1 Iodidimonas muriae strain JCM 17843 sequence03, whole genome shotgun sequence 378,685
NZ_BMOV01000004.1 Iodidimonas muriae strain JCM 17843 sequence04, whole genome shotgun sequence 244,186
NZ_BMOV01000005.1 Iodidimonas muriae strain JCM 17843 sequence05, whole genome shotgun sequence 238,578
NZ_BMOV01000006.1 Iodidimonas muriae strain JCM 17843 sequence06, whole genome shotgun sequence 236,197
NZ_BMOV01000007.1 Iodidimonas muriae strain JCM 17843 sequence07, whole genome shotgun sequence 176,236
NZ_BMOV01000008.1 Iodidimonas muriae strain JCM 17843 sequence08, whole genome shotgun sequence 159,453
NZ_BMOV01000009.1 Iodidimonas muriae strain JCM 17843 sequence09, whole genome shotgun sequence 105,231
NZ_BMOV01000010.1 Iodidimonas muriae strain JCM 17843 sequence10, whole genome shotgun sequence 75,613
NZ_BMOV01000011.1 Iodidimonas muriae strain JCM 17843 sequence11, whole genome shotgun sequence 68,067
NZ_BMOV01000012.1 Iodidimonas muriae strain JCM 17843 sequence12, whole genome shotgun sequence 65,097
NZ_BMOV01000013.1 Iodidimonas muriae strain JCM 17843 sequence13, whole genome shotgun sequence 64,729
NZ_BMOV01000014.1 Iodidimonas muriae strain JCM 17843 sequence14, whole genome shotgun sequence 29,838
NZ_BMOV01000015.1 Iodidimonas muriae strain JCM 17843 sequence15, whole genome shotgun sequence 28,662
NZ_BMOV01000016.1 Iodidimonas muriae strain JCM 17843 sequence16, whole genome shotgun sequence 15,921
NZ_BMOV01000017.1 Iodidimonas muriae strain JCM 17843 sequence17, whole genome shotgun sequence 15,656
NZ_BMOV01000018.1 Iodidimonas muriae strain JCM 17843 sequence18, whole genome shotgun sequence 5,912
NZ_BMOV01000019.1 Iodidimonas muriae strain JCM 17843 sequence19, whole genome shotgun sequence 4,615
NZ_BMOV01000020.1 Iodidimonas muriae strain JCM 17843 sequence20, whole genome shotgun sequence 3,789
NZ_BMOV01000021.1 Iodidimonas muriae strain JCM 17843 sequence21, whole genome shotgun sequence 2,763
NZ_BMOV01000022.1 Iodidimonas muriae strain JCM 17843 sequence22, whole genome shotgun sequence 1,056
NZ_BMOV01000023.1 Iodidimonas muriae strain JCM 17843 sequence23, whole genome shotgun sequence 824
NZ_BMOV01000024.1 Iodidimonas muriae strain JCM 17843 sequence24, whole genome shotgun sequence 802
NZ_BMOV01000025.1 Iodidimonas muriae strain JCM 17843 sequence25, whole genome shotgun sequence 715

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory