fast.genomicscompare 6,575 genera of bacteria & archaea

 

Halocalculus aciditolerans JCM 19596

Genome identifier: GCF_014647475.1

NCBI assembly name: ASM1464747v1

GTDB taxonomy: Archaea, Halobacteriota, Halobacteria, Halobacteriales, Halobacteriaceae, Halocalculus, Halocalculus aciditolerans

NCBI taxonomy: Archaea, Euryarchaeota, Halobacteria, Halobacteriales, Halobacteriaceae, Halocalculus, Halocalculus aciditolerans

Scaffolds: 27

Genes: 3,520 Protein-coding: 3,440 RNAs: 49 pseudogenes: 31

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_BMPG01000001.1 Halocalculus aciditolerans strain JCM 19596 sequence01, whole genome shotgun sequence 1,250,801
NZ_BMPG01000002.1 Halocalculus aciditolerans strain JCM 19596 sequence02, whole genome shotgun sequence 875,382
NZ_BMPG01000003.1 Halocalculus aciditolerans strain JCM 19596 sequence03, whole genome shotgun sequence 533,175
NZ_BMPG01000004.1 Halocalculus aciditolerans strain JCM 19596 sequence04, whole genome shotgun sequence 237,091
NZ_BMPG01000005.1 Halocalculus aciditolerans strain JCM 19596 sequence05, whole genome shotgun sequence 139,161
NZ_BMPG01000006.1 Halocalculus aciditolerans strain JCM 19596 sequence06, whole genome shotgun sequence 118,558
NZ_BMPG01000007.1 Halocalculus aciditolerans strain JCM 19596 sequence07, whole genome shotgun sequence 68,695
NZ_BMPG01000008.1 Halocalculus aciditolerans strain JCM 19596 sequence08, whole genome shotgun sequence 62,189
NZ_BMPG01000009.1 Halocalculus aciditolerans strain JCM 19596 sequence09, whole genome shotgun sequence 36,147
NZ_BMPG01000010.1 Halocalculus aciditolerans strain JCM 19596 sequence10, whole genome shotgun sequence 30,367
NZ_BMPG01000011.1 Halocalculus aciditolerans strain JCM 19596 sequence11, whole genome shotgun sequence 12,683
NZ_BMPG01000012.1 Halocalculus aciditolerans strain JCM 19596 sequence12, whole genome shotgun sequence 1,583
NZ_BMPG01000013.1 Halocalculus aciditolerans strain JCM 19596 sequence13, whole genome shotgun sequence 1,561
NZ_BMPG01000014.1 Halocalculus aciditolerans strain JCM 19596 sequence14, whole genome shotgun sequence 1,552
NZ_BMPG01000015.1 Halocalculus aciditolerans strain JCM 19596 sequence15, whole genome shotgun sequence 1,544
NZ_BMPG01000016.1 Halocalculus aciditolerans strain JCM 19596 sequence16, whole genome shotgun sequence 1,532
NZ_BMPG01000017.1 Halocalculus aciditolerans strain JCM 19596 sequence17, whole genome shotgun sequence 1,493
NZ_BMPG01000018.1 Halocalculus aciditolerans strain JCM 19596 sequence18, whole genome shotgun sequence 875
NZ_BMPG01000019.1 Halocalculus aciditolerans strain JCM 19596 sequence19, whole genome shotgun sequence 858
NZ_BMPG01000020.1 Halocalculus aciditolerans strain JCM 19596 sequence20, whole genome shotgun sequence 818
NZ_BMPG01000021.1 Halocalculus aciditolerans strain JCM 19596 sequence21, whole genome shotgun sequence 794
NZ_BMPG01000022.1 Halocalculus aciditolerans strain JCM 19596 sequence22, whole genome shotgun sequence 717
NZ_BMPG01000023.1 Halocalculus aciditolerans strain JCM 19596 sequence23, whole genome shotgun sequence 629
NZ_BMPG01000024.1 Halocalculus aciditolerans strain JCM 19596 sequence24, whole genome shotgun sequence 561
NZ_BMPG01000025.1 Halocalculus aciditolerans strain JCM 19596 sequence25, whole genome shotgun sequence 539
NZ_BMPG01000026.1 Halocalculus aciditolerans strain JCM 19596 sequence26, whole genome shotgun sequence 533
NZ_BMPG01000027.1 Halocalculus aciditolerans strain JCM 19596 sequence27, whole genome shotgun sequence 507

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory