fast.genomicscompare 6,575 genera of bacteria & archaea

 

Halioglobus_A pacificus KCTC 23430

Genome identifier: GCF_014652275.1

NCBI assembly name: ASM1465227v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Halieaceae, Halioglobus_A, Halioglobus_A pacificus

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Cellvibrionales, Halieaceae, Halioglobus, Halioglobus pacificus

Scaffolds: 8

Genes: 3,130 Protein-coding: 3,075 RNAs: 45 pseudogenes: 10

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_BMYM01000001.1 Halioglobus pacificus strain KCTC 23430 sequence1, whole genome shotgun sequence 1,938,067
NZ_BMYM01000002.1 Halioglobus pacificus strain KCTC 23430 sequence2, whole genome shotgun sequence 1,022,064
NZ_BMYM01000003.1 Halioglobus pacificus strain KCTC 23430 sequence3, whole genome shotgun sequence 283,249
NZ_BMYM01000004.1 Halioglobus pacificus strain KCTC 23430 sequence4, whole genome shotgun sequence 85,381
NZ_BMYM01000005.1 Halioglobus pacificus strain KCTC 23430 sequence5, whole genome shotgun sequence 64,444
NZ_BMYM01000006.1 Halioglobus pacificus strain KCTC 23430 sequence6, whole genome shotgun sequence 18,405
NZ_BMYM01000007.1 Halioglobus pacificus strain KCTC 23430 sequence7, whole genome shotgun sequence 5,653
NZ_BMYM01000008.1 Halioglobus pacificus strain KCTC 23430 sequence8, whole genome shotgun sequence 1,042

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory