fast.genomicscompare 6,575 genera of bacteria & archaea

 

Limoniibacter endophyticus KCTC 42097

Genome identifier: GCF_014652835.1

NCBI assembly name: ASM1465283v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Limoniibacter, Limoniibacter endophyticus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Hyphomicrobiaceae, Limoniibacter, Limoniibacter endophyticus

Scaffolds: 24

Genes: 3,531 Protein-coding: 3,427 RNAs: 59 pseudogenes: 45

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_BMZO01000001.1 Limoniibacter endophyticus strain KCTC 42097 sequence01, whole genome shotgun sequence 497,304
NZ_BMZO01000002.1 Limoniibacter endophyticus strain KCTC 42097 sequence02, whole genome shotgun sequence 413,070
NZ_BMZO01000003.1 Limoniibacter endophyticus strain KCTC 42097 sequence03, whole genome shotgun sequence 398,075
NZ_BMZO01000004.1 Limoniibacter endophyticus strain KCTC 42097 sequence04, whole genome shotgun sequence 326,558
NZ_BMZO01000005.1 Limoniibacter endophyticus strain KCTC 42097 sequence05, whole genome shotgun sequence 321,286
NZ_BMZO01000006.1 Limoniibacter endophyticus strain KCTC 42097 sequence06, whole genome shotgun sequence 303,152
NZ_BMZO01000007.1 Limoniibacter endophyticus strain KCTC 42097 sequence07, whole genome shotgun sequence 266,974
NZ_BMZO01000008.1 Limoniibacter endophyticus strain KCTC 42097 sequence08, whole genome shotgun sequence 249,832
NZ_BMZO01000009.1 Limoniibacter endophyticus strain KCTC 42097 sequence09, whole genome shotgun sequence 231,674
NZ_BMZO01000010.1 Limoniibacter endophyticus strain KCTC 42097 sequence10, whole genome shotgun sequence 215,813
NZ_BMZO01000011.1 Limoniibacter endophyticus strain KCTC 42097 sequence11, whole genome shotgun sequence 177,199
NZ_BMZO01000012.1 Limoniibacter endophyticus strain KCTC 42097 sequence12, whole genome shotgun sequence 147,030
NZ_BMZO01000013.1 Limoniibacter endophyticus strain KCTC 42097 sequence13, whole genome shotgun sequence 52,353
NZ_BMZO01000014.1 Limoniibacter endophyticus strain KCTC 42097 sequence14, whole genome shotgun sequence 30,530
NZ_BMZO01000015.1 Limoniibacter endophyticus strain KCTC 42097 sequence15, whole genome shotgun sequence 9,779
NZ_BMZO01000016.1 Limoniibacter endophyticus strain KCTC 42097 sequence16, whole genome shotgun sequence 5,150
NZ_BMZO01000017.1 Limoniibacter endophyticus strain KCTC 42097 sequence17, whole genome shotgun sequence 3,048
NZ_BMZO01000018.1 Limoniibacter endophyticus strain KCTC 42097 sequence18, whole genome shotgun sequence 2,650
NZ_BMZO01000019.1 Limoniibacter endophyticus strain KCTC 42097 sequence19, whole genome shotgun sequence 1,306
NZ_BMZO01000020.1 Limoniibacter endophyticus strain KCTC 42097 sequence20, whole genome shotgun sequence 1,021
NZ_BMZO01000021.1 Limoniibacter endophyticus strain KCTC 42097 sequence21, whole genome shotgun sequence 953
NZ_BMZO01000022.1 Limoniibacter endophyticus strain KCTC 42097 sequence22, whole genome shotgun sequence 934
NZ_BMZO01000023.1 Limoniibacter endophyticus strain KCTC 42097 sequence23, whole genome shotgun sequence 852
NZ_BMZO01000024.1 Limoniibacter endophyticus strain KCTC 42097 sequence24, whole genome shotgun sequence 602

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory