fast.genomicscompare 6,575 genera of bacteria & archaea

 

Corticibacterium populi KCTC 42249

Genome identifier: GCF_014652875.1

NCBI assembly name: ASM1465287v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Corticibacterium, Corticibacterium populi

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Phyllobacteriaceae, Corticibacterium, Corticibacterium populi

Scaffolds: 16

Genes: 4,121 Protein-coding: 4,019 RNAs: 59 pseudogenes: 43

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_BMZQ01000001.1 Tianweitania populi strain KCTC 42249 sequence01, whole genome shotgun sequence 1,921,531
NZ_BMZQ01000002.1 Tianweitania populi strain KCTC 42249 sequence02, whole genome shotgun sequence 1,463,426
NZ_BMZQ01000003.1 Tianweitania populi strain KCTC 42249 sequence03, whole genome shotgun sequence 246,831
NZ_BMZQ01000004.1 Tianweitania populi strain KCTC 42249 sequence04, whole genome shotgun sequence 215,530
NZ_BMZQ01000005.1 Tianweitania populi strain KCTC 42249 sequence05, whole genome shotgun sequence 200,684
NZ_BMZQ01000006.1 Tianweitania populi strain KCTC 42249 sequence06, whole genome shotgun sequence 129,205
NZ_BMZQ01000007.1 Tianweitania populi strain KCTC 42249 sequence07, whole genome shotgun sequence 71,369
NZ_BMZQ01000008.1 Tianweitania populi strain KCTC 42249 sequence08, whole genome shotgun sequence 29,823
NZ_BMZQ01000009.1 Tianweitania populi strain KCTC 42249 sequence09, whole genome shotgun sequence 4,235
NZ_BMZQ01000010.1 Tianweitania populi strain KCTC 42249 sequence10, whole genome shotgun sequence 875
NZ_BMZQ01000011.1 Tianweitania populi strain KCTC 42249 sequence11, whole genome shotgun sequence 872
NZ_BMZQ01000012.1 Tianweitania populi strain KCTC 42249 sequence12, whole genome shotgun sequence 684
NZ_BMZQ01000013.1 Tianweitania populi strain KCTC 42249 sequence13, whole genome shotgun sequence 602
NZ_BMZQ01000014.1 Tianweitania populi strain KCTC 42249 sequence14, whole genome shotgun sequence 595
NZ_BMZQ01000015.1 Tianweitania populi strain KCTC 42249 sequence15, whole genome shotgun sequence 577
NZ_BMZQ01000016.1 Tianweitania populi strain KCTC 42249 sequence16, whole genome shotgun sequence 547

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory