fast.genomicscompare 6,575 genera of bacteria & archaea

 

FACHB-1406 sp014698145 FACHB-1406

Genome identifier: GCF_014698145.1

NCBI assembly name: ASM1469814v1

GTDB taxonomy: Bacteria, Cyanobacteriota, Cyanobacteriia, Cyanobacteriales, Spirulinaceae, FACHB-1406, FACHB-1406 sp014698145

NCBI taxonomy: Bacteria, Cyanobacteriota, Cyanophyceae, Oscillatoriales, Oscillatoriaceae, Oscillatoria

Scaffolds: 42

Genes: 4,788 Protein-coding: 4,501 RNAs: 84 pseudogenes: 203

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACJSM010000001.1 Oscillatoria sp. FACHB-1406 contig1, whole genome shotgun sequence 602,367
NZ_JACJSM010000002.1 Oscillatoria sp. FACHB-1406 contig2, whole genome shotgun sequence 374,340
NZ_JACJSM010000003.1 Oscillatoria sp. FACHB-1406 contig3, whole genome shotgun sequence 362,540
NZ_JACJSM010000004.1 Oscillatoria sp. FACHB-1406 contig4, whole genome shotgun sequence 272,493
NZ_JACJSM010000005.1 Oscillatoria sp. FACHB-1406 contig5, whole genome shotgun sequence 260,900
NZ_JACJSM010000006.1 Oscillatoria sp. FACHB-1406 contig6, whole genome shotgun sequence 258,121
NZ_JACJSM010000007.1 Oscillatoria sp. FACHB-1406 contig7, whole genome shotgun sequence 249,499
NZ_JACJSM010000008.1 Oscillatoria sp. FACHB-1406 contig8, whole genome shotgun sequence 180,968
NZ_JACJSM010000009.1 Oscillatoria sp. FACHB-1406 contig9, whole genome shotgun sequence 165,679
NZ_JACJSM010000010.1 Oscillatoria sp. FACHB-1406 contig10, whole genome shotgun sequence 164,929
NZ_JACJSM010000011.1 Oscillatoria sp. FACHB-1406 contig11, whole genome shotgun sequence 160,197
NZ_JACJSM010000012.1 Oscillatoria sp. FACHB-1406 contig12, whole genome shotgun sequence 144,186
NZ_JACJSM010000013.1 Oscillatoria sp. FACHB-1406 contig13, whole genome shotgun sequence 140,204
NZ_JACJSM010000014.1 Oscillatoria sp. FACHB-1406 contig14, whole genome shotgun sequence 131,055
NZ_JACJSM010000015.1 Oscillatoria sp. FACHB-1406 contig15, whole genome shotgun sequence 130,437
NZ_JACJSM010000016.1 Oscillatoria sp. FACHB-1406 contig16, whole genome shotgun sequence 127,550
NZ_JACJSM010000017.1 Oscillatoria sp. FACHB-1406 contig17, whole genome shotgun sequence 127,156
NZ_JACJSM010000018.1 Oscillatoria sp. FACHB-1406 contig18, whole genome shotgun sequence 117,830
NZ_JACJSM010000019.1 Oscillatoria sp. FACHB-1406 contig19, whole genome shotgun sequence 107,998
NZ_JACJSM010000020.1 Oscillatoria sp. FACHB-1406 contig20, whole genome shotgun sequence 101,347
NZ_JACJSM010000021.1 Oscillatoria sp. FACHB-1406 contig21, whole genome shotgun sequence 98,915
NZ_JACJSM010000022.1 Oscillatoria sp. FACHB-1406 contig22, whole genome shotgun sequence 98,201
NZ_JACJSM010000023.1 Oscillatoria sp. FACHB-1406 contig23, whole genome shotgun sequence 97,162
NZ_JACJSM010000024.1 Oscillatoria sp. FACHB-1406 contig24, whole genome shotgun sequence 91,237
NZ_JACJSM010000025.1 Oscillatoria sp. FACHB-1406 contig25, whole genome shotgun sequence 88,920
NZ_JACJSM010000026.1 Oscillatoria sp. FACHB-1406 contig26, whole genome shotgun sequence 88,472
NZ_JACJSM010000027.1 Oscillatoria sp. FACHB-1406 contig27, whole genome shotgun sequence 81,001
NZ_JACJSM010000028.1 Oscillatoria sp. FACHB-1406 contig28, whole genome shotgun sequence 73,747
NZ_JACJSM010000029.1 Oscillatoria sp. FACHB-1406 contig29, whole genome shotgun sequence 71,499
NZ_JACJSM010000030.1 Oscillatoria sp. FACHB-1406 contig30, whole genome shotgun sequence 58,422
NZ_JACJSM010000031.1 Oscillatoria sp. FACHB-1406 contig31, whole genome shotgun sequence 57,450
NZ_JACJSM010000032.1 Oscillatoria sp. FACHB-1406 contig32, whole genome shotgun sequence 54,964
NZ_JACJSM010000033.1 Oscillatoria sp. FACHB-1406 contig33, whole genome shotgun sequence 54,274
NZ_JACJSM010000034.1 Oscillatoria sp. FACHB-1406 contig34, whole genome shotgun sequence 52,897
NZ_JACJSM010000035.1 Oscillatoria sp. FACHB-1406 contig35, whole genome shotgun sequence 50,115
NZ_JACJSM010000036.1 Oscillatoria sp. FACHB-1406 contig36, whole genome shotgun sequence 45,926
NZ_JACJSM010000037.1 Oscillatoria sp. FACHB-1406 contig37, whole genome shotgun sequence 38,043
NZ_JACJSM010000038.1 Oscillatoria sp. FACHB-1406 contig38, whole genome shotgun sequence 27,147
NZ_JACJSM010000039.1 Oscillatoria sp. FACHB-1406 contig39, whole genome shotgun sequence 25,422
NZ_JACJSM010000040.1 Oscillatoria sp. FACHB-1406 contig40, whole genome shotgun sequence 22,715
NZ_JACJSM010000041.1 Oscillatoria sp. FACHB-1406 contig41, whole genome shotgun sequence 5,241
NZ_JACJSM010000042.1 Oscillatoria sp. FACHB-1406 contig42, whole genome shotgun sequence 5,211

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory