fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pontibacterium sinense N1Y112

Genome identifier: GCF_015209595.1

NCBI assembly name: ASM1520959v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Nitrincolaceae, Pontibacterium, Pontibacterium sinense

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Oceanospirillales, Oceanospirillaceae, Pontibacterium, Pontibacterium sinense

Scaffolds: 53

Genes: 4,235 Protein-coding: 4,061 RNAs: 73 pseudogenes: 101

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JADEYS010000001.1 Pontibacterium sinense strain N1Y112 NODE_1, whole genome shotgun sequence 493,819
NZ_JADEYS010000002.1 Pontibacterium sinense strain N1Y112 NODE_2, whole genome shotgun sequence 287,249
NZ_JADEYS010000003.1 Pontibacterium sinense strain N1Y112 NODE_3, whole genome shotgun sequence 274,599
NZ_JADEYS010000004.1 Pontibacterium sinense strain N1Y112 NODE_4, whole genome shotgun sequence 250,680
NZ_JADEYS010000005.1 Pontibacterium sinense strain N1Y112 NODE_5, whole genome shotgun sequence 250,139
NZ_JADEYS010000006.1 Pontibacterium sinense strain N1Y112 NODE_6, whole genome shotgun sequence 237,294
NZ_JADEYS010000007.1 Pontibacterium sinense strain N1Y112 NODE_7, whole genome shotgun sequence 198,294
NZ_JADEYS010000008.1 Pontibacterium sinense strain N1Y112 NODE_8, whole genome shotgun sequence 189,143
NZ_JADEYS010000009.1 Pontibacterium sinense strain N1Y112 NODE_9, whole genome shotgun sequence 170,741
NZ_JADEYS010000010.1 Pontibacterium sinense strain N1Y112 NODE_10, whole genome shotgun sequence 155,815
NZ_JADEYS010000011.1 Pontibacterium sinense strain N1Y112 NODE_11, whole genome shotgun sequence 145,047
NZ_JADEYS010000012.1 Pontibacterium sinense strain N1Y112 NODE_12, whole genome shotgun sequence 142,274
NZ_JADEYS010000013.1 Pontibacterium sinense strain N1Y112 NODE_13, whole genome shotgun sequence 139,062
NZ_JADEYS010000014.1 Pontibacterium sinense strain N1Y112 NODE_14, whole genome shotgun sequence 136,495
NZ_JADEYS010000015.1 Pontibacterium sinense strain N1Y112 NODE_15, whole genome shotgun sequence 135,220
NZ_JADEYS010000016.1 Pontibacterium sinense strain N1Y112 NODE_16, whole genome shotgun sequence 132,849
NZ_JADEYS010000017.1 Pontibacterium sinense strain N1Y112 NODE_17, whole genome shotgun sequence 122,741
NZ_JADEYS010000018.1 Pontibacterium sinense strain N1Y112 NODE_18, whole genome shotgun sequence 103,481
NZ_JADEYS010000019.1 Pontibacterium sinense strain N1Y112 NODE_19, whole genome shotgun sequence 101,613
NZ_JADEYS010000020.1 Pontibacterium sinense strain N1Y112 NODE_20, whole genome shotgun sequence 100,189
NZ_JADEYS010000021.1 Pontibacterium sinense strain N1Y112 NODE_21, whole genome shotgun sequence 99,198
NZ_JADEYS010000022.1 Pontibacterium sinense strain N1Y112 NODE_22, whole genome shotgun sequence 87,074
NZ_JADEYS010000023.1 Pontibacterium sinense strain N1Y112 NODE_23, whole genome shotgun sequence 80,847
NZ_JADEYS010000024.1 Pontibacterium sinense strain N1Y112 NODE_24, whole genome shotgun sequence 72,312
NZ_JADEYS010000025.1 Pontibacterium sinense strain N1Y112 NODE_25, whole genome shotgun sequence 61,747
NZ_JADEYS010000026.1 Pontibacterium sinense strain N1Y112 NODE_26, whole genome shotgun sequence 61,685
NZ_JADEYS010000027.1 Pontibacterium sinense strain N1Y112 NODE_27, whole genome shotgun sequence 56,224
NZ_JADEYS010000028.1 Pontibacterium sinense strain N1Y112 NODE_28, whole genome shotgun sequence 54,071
NZ_JADEYS010000029.1 Pontibacterium sinense strain N1Y112 NODE_29, whole genome shotgun sequence 51,692
NZ_JADEYS010000030.1 Pontibacterium sinense strain N1Y112 NODE_30, whole genome shotgun sequence 50,413
NZ_JADEYS010000031.1 Pontibacterium sinense strain N1Y112 NODE_31, whole genome shotgun sequence 41,532
NZ_JADEYS010000032.1 Pontibacterium sinense strain N1Y112 NODE_32, whole genome shotgun sequence 39,725
NZ_JADEYS010000033.1 Pontibacterium sinense strain N1Y112 NODE_33, whole genome shotgun sequence 30,610
NZ_JADEYS010000034.1 Pontibacterium sinense strain N1Y112 NODE_34, whole genome shotgun sequence 29,828
NZ_JADEYS010000035.1 Pontibacterium sinense strain N1Y112 NODE_35, whole genome shotgun sequence 22,349
NZ_JADEYS010000036.1 Pontibacterium sinense strain N1Y112 NODE_36, whole genome shotgun sequence 14,927
NZ_JADEYS010000037.1 Pontibacterium sinense strain N1Y112 NODE_37, whole genome shotgun sequence 3,303
NZ_JADEYS010000038.1 Pontibacterium sinense strain N1Y112 NODE_38, whole genome shotgun sequence 3,291
NZ_JADEYS010000039.1 Pontibacterium sinense strain N1Y112 NODE_39, whole genome shotgun sequence 1,851
NZ_JADEYS010000040.1 Pontibacterium sinense strain N1Y112 NODE_40, whole genome shotgun sequence 1,321
NZ_JADEYS010000041.1 Pontibacterium sinense strain N1Y112 NODE_41, whole genome shotgun sequence 1,270
NZ_JADEYS010000042.1 Pontibacterium sinense strain N1Y112 NODE_42, whole genome shotgun sequence 1,214
NZ_JADEYS010000043.1 Pontibacterium sinense strain N1Y112 NODE_43, whole genome shotgun sequence 1,207
NZ_JADEYS010000044.1 Pontibacterium sinense strain N1Y112 NODE_44, whole genome shotgun sequence 917
NZ_JADEYS010000045.1 Pontibacterium sinense strain N1Y112 NODE_45, whole genome shotgun sequence 807
NZ_JADEYS010000046.1 Pontibacterium sinense strain N1Y112 NODE_46, whole genome shotgun sequence 602
NZ_JADEYS010000047.1 Pontibacterium sinense strain N1Y112 NODE_47, whole genome shotgun sequence 471
NZ_JADEYS010000048.1 Pontibacterium sinense strain N1Y112 NODE_48, whole genome shotgun sequence 455
NZ_JADEYS010000049.1 Pontibacterium sinense strain N1Y112 NODE_49, whole genome shotgun sequence 352
NZ_JADEYS010000050.1 Pontibacterium sinense strain N1Y112 NODE_50, whole genome shotgun sequence 301
NZ_JADEYS010000051.1 Pontibacterium sinense strain N1Y112 NODE_51, whole genome shotgun sequence 226
NZ_JADEYS010000052.1 Pontibacterium sinense strain N1Y112 NODE_52, whole genome shotgun sequence 225
NZ_JADEYS010000053.1 Pontibacterium sinense strain N1Y112 NODE_53, whole genome shotgun sequence 215

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory