fast.genomicscompare 6,575 genera of bacteria & archaea

 

ESH-2018B sp015476335 ESH_2018B

Genome identifier: GCF_015476335.1

NCBI assembly name: ASM1547633v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rickettsiales, Rickettsiaceae, ESH-2018B, ESH-2018B sp015476335

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rickettsiales, Rickettsiaceae, Rickettsia

Scaffolds: 29

Genes: 941 Protein-coding: 890 RNAs: 40 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JADAQY010000001.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B Contig_1_con, whole genome shotgun sequence 298,630
NZ_JADAQY010000002.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B Contig_2_con, whole genome shotgun sequence 250,385
NZ_JADAQY010000003.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B Contig_3_con, whole genome shotgun sequence 148,255
NZ_JADAQY010000004.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B Contig_4_con, whole genome shotgun sequence 2,066
NZ_JADAQY010000005.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_2_length_226786_cov_28.131060, whole genome shotgun sequence 226,786
NZ_JADAQY010000006.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_10_length_36721_cov_26.651774, whole genome shotgun sequence 36,721
NZ_JADAQY010000007.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_11_length_29316_cov_19.779814, whole genome shotgun sequence 29,316
NZ_JADAQY010000008.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_19_length_9642_cov_1.243405, whole genome shotgun sequence 9,642
NZ_JADAQY010000009.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_22_length_5699_cov_25.287688, whole genome shotgun sequence 5,699
NZ_JADAQY010000010.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_23_length_5572_cov_0.997245, whole genome shotgun sequence 5,572
NZ_JADAQY010000011.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_26_length_5173_cov_0.722949, whole genome shotgun sequence 5,173
NZ_JADAQY010000012.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_31_length_3052_cov_0.710769, whole genome shotgun sequence 3,052
NZ_JADAQY010000013.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_37_length_2374_cov_0.562973, whole genome shotgun sequence 2,374
NZ_JADAQY010000014.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_42_length_2016_cov_0.672843, whole genome shotgun sequence 2,016
NZ_JADAQY010000015.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_48_length_1805_cov_73.852205, whole genome shotgun sequence 1,805
NZ_JADAQY010000016.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_52_length_1658_cov_0.467668, whole genome shotgun sequence 1,658
NZ_JADAQY010000017.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_54_length_1603_cov_0.414634, whole genome shotgun sequence 1,603
NZ_JADAQY010000018.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_58_length_1564_cov_0.521921, whole genome shotgun sequence 1,564
NZ_JADAQY010000019.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_61_length_1523_cov_6.814470, whole genome shotgun sequence 1,523
NZ_JADAQY010000020.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_64_length_1493_cov_0.553441, whole genome shotgun sequence 1,493
NZ_JADAQY010000021.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_65_length_1493_cov_0.474378, whole genome shotgun sequence 1,493
NZ_JADAQY010000022.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_67_length_1416_cov_11.320403, whole genome shotgun sequence 1,416
NZ_JADAQY010000023.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_70_length_1380_cov_0.600160, whole genome shotgun sequence 1,380
NZ_JADAQY010000024.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_74_length_1334_cov_0.354598, whole genome shotgun sequence 1,334
NZ_JADAQY010000025.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_75_length_1331_cov_0.563123, whole genome shotgun sequence 1,331
NZ_JADAQY010000026.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_81_length_1279_cov_0.620660, whole genome shotgun sequence 1,279
NZ_JADAQY010000027.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_83_length_1269_cov_0.492995, whole genome shotgun sequence 1,269
NZ_JADAQY010000028.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_91_length_1149_cov_0.780822, whole genome shotgun sequence 1,149
NZ_JADAQY010000029.1 Rickettsia endosymbiont of Cardiosporidium cionae strain ESH_2018B NODE_99_length_1055_cov_0.645474, whole genome shotgun sequence 1,055

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory