fast.genomicscompare 6,575 genera of bacteria & archaea

 

GRL18 sp016097415 Gae_SOB

Genome identifier: GCF_016097415.1

NCBI assembly name: ASM1609741v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, GRL18, GRL18, GRL18, GRL18 sp016097415

NCBI taxonomy: Bacteria

Scaffolds: 11

Genes: 5,257 Protein-coding: 4,767 RNAs: 64 pseudogenes: 426

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAEHGE010000001.1 Sulfur-oxidizing endosymbiont of Gigantopelta aegis strain Gae_SOB scaffold1_size4213896, whole genome shotgun sequence 4,213,896
NZ_JAEHGE010000002.1 Sulfur-oxidizing endosymbiont of Gigantopelta aegis strain Gae_SOB scaffold2_size275236, whole genome shotgun sequence 275,236
NZ_JAEHGE010000003.1 Sulfur-oxidizing endosymbiont of Gigantopelta aegis strain Gae_SOB scaffold3_size260879, whole genome shotgun sequence 260,879
NZ_JAEHGE010000004.1 Sulfur-oxidizing endosymbiont of Gigantopelta aegis strain Gae_SOB scaffold4_size47704, whole genome shotgun sequence 47,704
NZ_JAEHGE010000005.1 Sulfur-oxidizing endosymbiont of Gigantopelta aegis strain Gae_SOB scaffold5_size35203, whole genome shotgun sequence 35,203
NZ_JAEHGE010000006.1 Sulfur-oxidizing endosymbiont of Gigantopelta aegis strain Gae_SOB scaffold6_size33376, whole genome shotgun sequence 33,376
NZ_JAEHGE010000007.1 Sulfur-oxidizing endosymbiont of Gigantopelta aegis strain Gae_SOB scaffold7_size22617, whole genome shotgun sequence 22,617
NZ_JAEHGE010000008.1 Sulfur-oxidizing endosymbiont of Gigantopelta aegis strain Gae_SOB scaffold8_size9016, whole genome shotgun sequence 9,016
NZ_JAEHGE010000009.1 Sulfur-oxidizing endosymbiont of Gigantopelta aegis strain Gae_SOB scaffold9_size7741, whole genome shotgun sequence 7,741
NZ_JAEHGE010000010.1 Sulfur-oxidizing endosymbiont of Gigantopelta aegis strain Gae_SOB scaffold10_size3168, whole genome shotgun sequence 3,168
NZ_JAEHGE010000011.1 Sulfur-oxidizing endosymbiont of Gigantopelta aegis strain Gae_SOB scaffold11_size1280, whole genome shotgun sequence 1,280

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory