fast.genomicscompare 6,575 genera of bacteria & archaea

 

Arenibacterium_A arenosum CAU 1593

Genome identifier: GCF_016428585.1

NCBI assembly name: ASM1642858v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Arenibacterium_A, Arenibacterium_A arenosum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Arenibacterium, Arenibacterium arenosum

Scaffolds: 26

Genes: 3,907 Protein-coding: 3,806 RNAs: 48 pseudogenes: 53

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAELVR010000001.1 Arenibacterium arenosum strain CAU 1593 contig1, whole genome shotgun sequence 592,669
NZ_JAELVR010000002.1 Arenibacterium arenosum strain CAU 1593 contig2, whole genome shotgun sequence 372,544
NZ_JAELVR010000003.1 Arenibacterium arenosum strain CAU 1593 contig3, whole genome shotgun sequence 370,672
NZ_JAELVR010000004.1 Arenibacterium arenosum strain CAU 1593 contig4, whole genome shotgun sequence 327,604
NZ_JAELVR010000005.1 Arenibacterium arenosum strain CAU 1593 contig5, whole genome shotgun sequence 308,593
NZ_JAELVR010000006.1 Arenibacterium arenosum strain CAU 1593 contig6, whole genome shotgun sequence 256,333
NZ_JAELVR010000007.1 Arenibacterium arenosum strain CAU 1593 contig7, whole genome shotgun sequence 251,670
NZ_JAELVR010000008.1 Arenibacterium arenosum strain CAU 1593 contig8, whole genome shotgun sequence 246,086
NZ_JAELVR010000009.1 Arenibacterium arenosum strain CAU 1593 contig9, whole genome shotgun sequence 223,894
NZ_JAELVR010000010.1 Arenibacterium arenosum strain CAU 1593 contig10, whole genome shotgun sequence 219,871
NZ_JAELVR010000011.1 Arenibacterium arenosum strain CAU 1593 contig11, whole genome shotgun sequence 204,175
NZ_JAELVR010000012.1 Arenibacterium arenosum strain CAU 1593 contig12, whole genome shotgun sequence 200,270
NZ_JAELVR010000013.1 Arenibacterium arenosum strain CAU 1593 contig13, whole genome shotgun sequence 171,585
NZ_JAELVR010000014.1 Arenibacterium arenosum strain CAU 1593 contig14, whole genome shotgun sequence 64,760
NZ_JAELVR010000015.1 Arenibacterium arenosum strain CAU 1593 contig15, whole genome shotgun sequence 49,657
NZ_JAELVR010000016.1 Arenibacterium arenosum strain CAU 1593 contig16, whole genome shotgun sequence 48,245
NZ_JAELVR010000017.1 Arenibacterium arenosum strain CAU 1593 contig17, whole genome shotgun sequence 34,794
NZ_JAELVR010000018.1 Arenibacterium arenosum strain CAU 1593 contig18, whole genome shotgun sequence 16,945
NZ_JAELVR010000019.1 Arenibacterium arenosum strain CAU 1593 contig19, whole genome shotgun sequence 7,304
NZ_JAELVR010000020.1 Arenibacterium arenosum strain CAU 1593 contig20, whole genome shotgun sequence 3,910
NZ_JAELVR010000021.1 Arenibacterium arenosum strain CAU 1593 contig21, whole genome shotgun sequence 2,063
NZ_JAELVR010000022.1 Arenibacterium arenosum strain CAU 1593 contig22, whole genome shotgun sequence 1,463
NZ_JAELVR010000023.1 Arenibacterium arenosum strain CAU 1593 contig23, whole genome shotgun sequence 1,384
NZ_JAELVR010000024.1 Arenibacterium arenosum strain CAU 1593 contig24, whole genome shotgun sequence 1,187
NZ_JAELVR010000025.1 Arenibacterium arenosum strain CAU 1593 contig25, whole genome shotgun sequence 1,114
NZ_JAELVR010000026.1 Arenibacterium arenosum strain CAU 1593 contig26, whole genome shotgun sequence 1,034

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory