fast.genomicscompare 6,575 genera of bacteria & archaea

 

QFOP01 sp003248785 YIM B01966

Genome identifier: GCF_016461955.1

NCBI assembly name: ASM1646195v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, QFOP01, QFOP01 sp003248785

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Erythrobacteraceae, Qipengyuania

Scaffolds: 47

Genes: 2,424 Protein-coding: 2,268 RNAs: 56 pseudogenes: 100

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JADMNM010000001.1 Qipengyuania sp. YIM B01966 Scaffold1, whole genome shotgun sequence 533,178
NZ_JADMNM010000002.1 Qipengyuania sp. YIM B01966 Scaffold2, whole genome shotgun sequence 443,264
NZ_JADMNM010000003.1 Qipengyuania sp. YIM B01966 Scaffold3, whole genome shotgun sequence 250,186
NZ_JADMNM010000004.1 Qipengyuania sp. YIM B01966 Scaffold4, whole genome shotgun sequence 211,268
NZ_JADMNM010000005.1 Qipengyuania sp. YIM B01966 Scaffold5, whole genome shotgun sequence 189,921
NZ_JADMNM010000006.1 Qipengyuania sp. YIM B01966 Scaffold6, whole genome shotgun sequence 145,619
NZ_JADMNM010000007.1 Qipengyuania sp. YIM B01966 Scaffold7, whole genome shotgun sequence 125,477
NZ_JADMNM010000008.1 Qipengyuania sp. YIM B01966 Scaffold8, whole genome shotgun sequence 119,493
NZ_JADMNM010000009.1 Qipengyuania sp. YIM B01966 Scaffold9, whole genome shotgun sequence 83,861
NZ_JADMNM010000010.1 Qipengyuania sp. YIM B01966 Scaffold10, whole genome shotgun sequence 82,038
NZ_JADMNM010000011.1 Qipengyuania sp. YIM B01966 Scaffold11, whole genome shotgun sequence 60,096
NZ_JADMNM010000012.1 Qipengyuania sp. YIM B01966 Scaffold12, whole genome shotgun sequence 56,692
NZ_JADMNM010000013.1 Qipengyuania sp. YIM B01966 Scaffold13, whole genome shotgun sequence 19,166
NZ_JADMNM010000014.1 Qipengyuania sp. YIM B01966 Scaffold14, whole genome shotgun sequence 15,305
NZ_JADMNM010000015.1 Qipengyuania sp. YIM B01966 Scaffold15, whole genome shotgun sequence 13,502
NZ_JADMNM010000016.1 Qipengyuania sp. YIM B01966 Scaffold16, whole genome shotgun sequence 12,911
NZ_JADMNM010000017.1 Qipengyuania sp. YIM B01966 Scaffold17, whole genome shotgun sequence 12,317
NZ_JADMNM010000018.1 Qipengyuania sp. YIM B01966 Scaffold18, whole genome shotgun sequence 9,277
NZ_JADMNM010000019.1 Qipengyuania sp. YIM B01966 Scaffold19, whole genome shotgun sequence 8,881
NZ_JADMNM010000020.1 Qipengyuania sp. YIM B01966 Scaffold20, whole genome shotgun sequence 7,457
NZ_JADMNM010000021.1 Qipengyuania sp. YIM B01966 Scaffold21, whole genome shotgun sequence 6,685
NZ_JADMNM010000022.1 Qipengyuania sp. YIM B01966 Scaffold22, whole genome shotgun sequence 5,032
NZ_JADMNM010000023.1 Qipengyuania sp. YIM B01966 Scaffold23, whole genome shotgun sequence 4,665
NZ_JADMNM010000024.1 Qipengyuania sp. YIM B01966 Scaffold24, whole genome shotgun sequence 3,765
NZ_JADMNM010000025.1 Qipengyuania sp. YIM B01966 Scaffold25, whole genome shotgun sequence 2,770
NZ_JADMNM010000026.1 Qipengyuania sp. YIM B01966 Scaffold26, whole genome shotgun sequence 2,526
NZ_JADMNM010000027.1 Qipengyuania sp. YIM B01966 Scaffold27, whole genome shotgun sequence 1,960
NZ_JADMNM010000028.1 Qipengyuania sp. YIM B01966 Scaffold28, whole genome shotgun sequence 1,385
NZ_JADMNM010000029.1 Qipengyuania sp. YIM B01966 Scaffold29, whole genome shotgun sequence 1,353
NZ_JADMNM010000030.1 Qipengyuania sp. YIM B01966 Scaffold30, whole genome shotgun sequence 1,275
NZ_JADMNM010000031.1 Qipengyuania sp. YIM B01966 Scaffold31, whole genome shotgun sequence 1,241
NZ_JADMNM010000032.1 Qipengyuania sp. YIM B01966 Scaffold32, whole genome shotgun sequence 1,208
NZ_JADMNM010000033.1 Qipengyuania sp. YIM B01966 Scaffold33, whole genome shotgun sequence 1,093
NZ_JADMNM010000034.1 Qipengyuania sp. YIM B01966 Scaffold34, whole genome shotgun sequence 890
NZ_JADMNM010000035.1 Qipengyuania sp. YIM B01966 Scaffold35, whole genome shotgun sequence 846
NZ_JADMNM010000036.1 Qipengyuania sp. YIM B01966 Scaffold36, whole genome shotgun sequence 581
NZ_JADMNM010000037.1 Qipengyuania sp. YIM B01966 Scaffold37, whole genome shotgun sequence 542
NZ_JADMNM010000038.1 Qipengyuania sp. YIM B01966 Scaffold38, whole genome shotgun sequence 483
NZ_JADMNM010000039.1 Qipengyuania sp. YIM B01966 Scaffold39, whole genome shotgun sequence 458
NZ_JADMNM010000040.1 Qipengyuania sp. YIM B01966 Scaffold40, whole genome shotgun sequence 417
NZ_JADMNM010000041.1 Qipengyuania sp. YIM B01966 Scaffold41, whole genome shotgun sequence 233
NZ_JADMNM010000042.1 Qipengyuania sp. YIM B01966 Scaffold42, whole genome shotgun sequence 369
NZ_JADMNM010000043.1 Qipengyuania sp. YIM B01966 Scaffold43, whole genome shotgun sequence 352
NZ_JADMNM010000044.1 Qipengyuania sp. YIM B01966 Scaffold44, whole genome shotgun sequence 345
NZ_JADMNM010000045.1 Qipengyuania sp. YIM B01966 Scaffold45, whole genome shotgun sequence 317
NZ_JADMNM010000046.1 Qipengyuania sp. YIM B01966 Scaffold46, whole genome shotgun sequence 253
NZ_JADMNM010000047.1 Qipengyuania sp. YIM B01966 Scaffold47, whole genome shotgun sequence 251

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory