fast.genomicscompare 6,575 genera of bacteria & archaea

 

Sandaracinobacteroides hominis SZY PN-1

Genome identifier: GCF_016464365.1

NCBI assembly name: ASM1646436v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sandaracinobacteroides, Sandaracinobacteroides hominis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingosinicellaceae, Sandaracinobacteroides, Sandaracinobacteroides hominis

Scaffolds: 21

Genes: 3,405 Protein-coding: 3,317 RNAs: 49 pseudogenes: 39

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JADCUC010000001.1 Sandaracinobacteroides hominis strain SZY PN-1 SZY_PN-1, whole genome shotgun sequence 939,109
NZ_JADCUC010000002.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold2, whole genome shotgun sequence 547,556
NZ_JADCUC010000003.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold3, whole genome shotgun sequence 454,028
NZ_JADCUC010000004.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold4, whole genome shotgun sequence 402,236
NZ_JADCUC010000005.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold5, whole genome shotgun sequence 296,915
NZ_JADCUC010000006.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold6, whole genome shotgun sequence 258,084
NZ_JADCUC010000007.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold7, whole genome shotgun sequence 173,243
NZ_JADCUC010000008.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold8, whole genome shotgun sequence 115,400
NZ_JADCUC010000009.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold9, whole genome shotgun sequence 110,375
NZ_JADCUC010000010.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold10, whole genome shotgun sequence 51,066
NZ_JADCUC010000011.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold11, whole genome shotgun sequence 47,948
NZ_JADCUC010000012.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold12, whole genome shotgun sequence 34,600
NZ_JADCUC010000013.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold13, whole genome shotgun sequence 30,230
NZ_JADCUC010000014.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold14, whole genome shotgun sequence 28,449
NZ_JADCUC010000015.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold15, whole genome shotgun sequence 20,555
NZ_JADCUC010000016.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold16, whole genome shotgun sequence 9,536
NZ_JADCUC010000017.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold17, whole genome shotgun sequence 7,163
NZ_JADCUC010000018.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold18, whole genome shotgun sequence 1,035
NZ_JADCUC010000019.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold19, whole genome shotgun sequence 1,004
NZ_JADCUC010000020.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold20, whole genome shotgun sequence 887
NZ_JADCUC010000021.1 Sandaracinobacteroides hominis strain SZY PN-1 Scaffold21, whole genome shotgun sequence 789

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory