fast.genomicscompare 6,575 genera of bacteria & archaea

 

Thermohalobaculum xanthum M0105

Genome identifier: GCF_016623495.1

NCBI assembly name: ASM1662349v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Thermohalobaculum, Thermohalobaculum xanthum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Thermohalobaculum, Thermohalobaculum xanthum

Scaffolds: 34

Genes: 3,868 Protein-coding: 3,786 RNAs: 51 pseudogenes: 31

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAEHHL010000001.1 Thermohalobaculum xanthum strain M0105 contig1, whole genome shotgun sequence 1,070,915
NZ_JAEHHL010000002.1 Thermohalobaculum xanthum strain M0105 contig2, whole genome shotgun sequence 497,149
NZ_JAEHHL010000003.1 Thermohalobaculum xanthum strain M0105 contig3, whole genome shotgun sequence 76,133
NZ_JAEHHL010000004.1 Thermohalobaculum xanthum strain M0105 contig4, whole genome shotgun sequence 296,502
NZ_JAEHHL010000005.1 Thermohalobaculum xanthum strain M0105 contig5, whole genome shotgun sequence 159,675
NZ_JAEHHL010000006.1 Thermohalobaculum xanthum strain M0105 contig6, whole genome shotgun sequence 420,913
NZ_JAEHHL010000007.1 Thermohalobaculum xanthum strain M0105 contig7, whole genome shotgun sequence 318,202
NZ_JAEHHL010000008.1 Thermohalobaculum xanthum strain M0105 contig8, whole genome shotgun sequence 296,701
NZ_JAEHHL010000009.1 Thermohalobaculum xanthum strain M0105 contig9, whole genome shotgun sequence 216,914
NZ_JAEHHL010000010.1 Thermohalobaculum xanthum strain M0105 contig10, whole genome shotgun sequence 172,303
NZ_JAEHHL010000011.1 Thermohalobaculum xanthum strain M0105 contig11, whole genome shotgun sequence 15,668
NZ_JAEHHL010000012.1 Thermohalobaculum xanthum strain M0105 contig12, whole genome shotgun sequence 179,881
NZ_JAEHHL010000013.1 Thermohalobaculum xanthum strain M0105 contig13, whole genome shotgun sequence 62,345
NZ_JAEHHL010000014.1 Thermohalobaculum xanthum strain M0105 contig14, whole genome shotgun sequence 36,388
NZ_JAEHHL010000015.1 Thermohalobaculum xanthum strain M0105 contig15, whole genome shotgun sequence 76,266
NZ_JAEHHL010000016.1 Thermohalobaculum xanthum strain M0105 contig16, whole genome shotgun sequence 64,315
NZ_JAEHHL010000017.1 Thermohalobaculum xanthum strain M0105 contig17, whole genome shotgun sequence 39,935
NZ_JAEHHL010000018.1 Thermohalobaculum xanthum strain M0105 contig18, whole genome shotgun sequence 6,319
NZ_JAEHHL010000019.1 Thermohalobaculum xanthum strain M0105 contig19, whole genome shotgun sequence 20,405
NZ_JAEHHL010000020.1 Thermohalobaculum xanthum strain M0105 contig20, whole genome shotgun sequence 5,593
NZ_JAEHHL010000021.1 Thermohalobaculum xanthum strain M0105 contig21, whole genome shotgun sequence 5,405
NZ_JAEHHL010000022.1 Thermohalobaculum xanthum strain M0105 contig22, whole genome shotgun sequence 4,593
NZ_JAEHHL010000023.1 Thermohalobaculum xanthum strain M0105 contig23, whole genome shotgun sequence 2,443
NZ_JAEHHL010000024.1 Thermohalobaculum xanthum strain M0105 contig24, whole genome shotgun sequence 1,151
NZ_JAEHHL010000025.1 Thermohalobaculum xanthum strain M0105 contig25, whole genome shotgun sequence 629
NZ_JAEHHL010000026.1 Thermohalobaculum xanthum strain M0105 contig26, whole genome shotgun sequence 1,587
NZ_JAEHHL010000027.1 Thermohalobaculum xanthum strain M0105 contig27, whole genome shotgun sequence 1,407
NZ_JAEHHL010000028.1 Thermohalobaculum xanthum strain M0105 contig28, whole genome shotgun sequence 1,395
NZ_JAEHHL010000029.1 Thermohalobaculum xanthum strain M0105 contig29, whole genome shotgun sequence 1,201
NZ_JAEHHL010000030.1 Thermohalobaculum xanthum strain M0105 contig30, whole genome shotgun sequence 1,176
NZ_JAEHHL010000031.1 Thermohalobaculum xanthum strain M0105 contig31, whole genome shotgun sequence 318
NZ_JAEHHL010000032.1 Thermohalobaculum xanthum strain M0105 contig32, whole genome shotgun sequence 535
NZ_JAEHHL010000033.1 Thermohalobaculum xanthum strain M0105 contig33, whole genome shotgun sequence 572
NZ_JAEHHL010000034.1 Thermohalobaculum xanthum strain M0105 contig34, whole genome shotgun sequence 242

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory