fast.genomicscompare 6,575 genera of bacteria & archaea

 

Fuscibacter oryzae KVB23

Genome identifier: GCF_016765795.1

NCBI assembly name: ASM1676579v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Fuscibacter, Fuscibacter oryzae

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Fuscibacter, Fuscibacter oryzae

Scaffolds: 21

Genes: 3,811 Protein-coding: 3,732 RNAs: 52 pseudogenes: 27

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAESVP010000001.1 Fuscibacter oryzae strain KVB23 contig1, whole genome shotgun sequence 634,567
NZ_JAESVP010000002.1 Fuscibacter oryzae strain KVB23 contig2, whole genome shotgun sequence 545,152
NZ_JAESVP010000003.1 Fuscibacter oryzae strain KVB23 contig3, whole genome shotgun sequence 449,530
NZ_JAESVP010000004.1 Fuscibacter oryzae strain KVB23 contig4, whole genome shotgun sequence 446,226
NZ_JAESVP010000005.1 Fuscibacter oryzae strain KVB23 contig5, whole genome shotgun sequence 429,065
NZ_JAESVP010000006.1 Fuscibacter oryzae strain KVB23 contig6, whole genome shotgun sequence 263,781
NZ_JAESVP010000007.1 Fuscibacter oryzae strain KVB23 contig7, whole genome shotgun sequence 181,667
NZ_JAESVP010000008.1 Fuscibacter oryzae strain KVB23 contig8, whole genome shotgun sequence 159,977
NZ_JAESVP010000009.1 Fuscibacter oryzae strain KVB23 contig9, whole genome shotgun sequence 137,937
NZ_JAESVP010000010.1 Fuscibacter oryzae strain KVB23 contig10, whole genome shotgun sequence 135,172
NZ_JAESVP010000011.1 Fuscibacter oryzae strain KVB23 contig11, whole genome shotgun sequence 122,968
NZ_JAESVP010000012.1 Fuscibacter oryzae strain KVB23 contig12, whole genome shotgun sequence 84,822
NZ_JAESVP010000013.1 Fuscibacter oryzae strain KVB23 contig13, whole genome shotgun sequence 81,306
NZ_JAESVP010000014.1 Fuscibacter oryzae strain KVB23 contig14, whole genome shotgun sequence 60,477
NZ_JAESVP010000015.1 Fuscibacter oryzae strain KVB23 contig15, whole genome shotgun sequence 31,722
NZ_JAESVP010000016.1 Fuscibacter oryzae strain KVB23 contig16, whole genome shotgun sequence 27,606
NZ_JAESVP010000017.1 Fuscibacter oryzae strain KVB23 contig17, whole genome shotgun sequence 9,691
NZ_JAESVP010000018.1 Fuscibacter oryzae strain KVB23 contig18, whole genome shotgun sequence 2,324
NZ_JAESVP010000019.1 Fuscibacter oryzae strain KVB23 contig19, whole genome shotgun sequence 1,771
NZ_JAESVP010000020.1 Fuscibacter oryzae strain KVB23 contig20, whole genome shotgun sequence 1,764
NZ_JAESVP010000021.1 Fuscibacter oryzae strain KVB23 contig21, whole genome shotgun sequence 1,248

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory