fast.genomicscompare 6,575 genera of bacteria & archaea

 

Alkalicoccobacillus gibsonii KCCM 41407

Genome identifier: GCF_016798245.1

NCBI assembly name: ASM1679824v1

GTDB taxonomy: Bacteria, Bacillota, Bacilli, Bacillales_H, Bacillaceae_D, Alkalicoccobacillus, Alkalicoccobacillus gibsonii

NCBI taxonomy: Bacteria, Bacillota, Bacilli, Bacillales, Bacillaceae, Alkalicoccobacillus, Alkalicoccobacillus gibsonii

Scaffolds: 30

Genes: 4,112 Protein-coding: 4,014 RNAs: 83 pseudogenes: 15

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAEUZA010000001.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_1_length_1274031_cov_242.142628, whole genome shotgun sequence 1,274,031
NZ_JAEUZA010000002.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_2_length_971652_cov_334.733716, whole genome shotgun sequence 971,652
NZ_JAEUZA010000003.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_3_length_673396_cov_318.660702, whole genome shotgun sequence 673,396
NZ_JAEUZA010000004.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_4_length_366064_cov_272.122335, whole genome shotgun sequence 366,064
NZ_JAEUZA010000005.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_5_length_297386_cov_289.855729, whole genome shotgun sequence 297,386
NZ_JAEUZA010000006.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_6_length_109575_cov_263.496840, whole genome shotgun sequence 109,575
NZ_JAEUZA010000007.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_7_length_72051_cov_379.690638, whole genome shotgun sequence 72,051
NZ_JAEUZA010000008.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_8_length_71956_cov_406.762671, whole genome shotgun sequence 71,956
NZ_JAEUZA010000009.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_9_length_68419_cov_397.015379, whole genome shotgun sequence 68,419
NZ_JAEUZA010000010.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_10_length_24012_cov_487.431753, whole genome shotgun sequence 24,012
NZ_JAEUZA010000011.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_11_length_2236_cov_3155.478462, whole genome shotgun sequence 2,236
NZ_JAEUZA010000012.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_12_length_1664_cov_3072.051670, whole genome shotgun sequence 1,664
NZ_JAEUZA010000013.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_13_length_700_cov_3275.268058, whole genome shotgun sequence 700
NZ_JAEUZA010000014.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_14_length_414_cov_322.041543, whole genome shotgun sequence 414
NZ_JAEUZA010000015.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_15_length_354_cov_945.277978, whole genome shotgun sequence 354
NZ_JAEUZA010000016.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_16_length_332_cov_502.956863, whole genome shotgun sequence 332
NZ_JAEUZA010000017.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_17_length_312_cov_322.336170, whole genome shotgun sequence 312
NZ_JAEUZA010000018.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_18_length_311_cov_296.508547, whole genome shotgun sequence 311
NZ_JAEUZA010000019.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_19_length_299_cov_1603.261261, whole genome shotgun sequence 299
NZ_JAEUZA010000020.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_20_length_267_cov_363.621053, whole genome shotgun sequence 267
NZ_JAEUZA010000021.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_21_length_265_cov_385.781915, whole genome shotgun sequence 265
NZ_JAEUZA010000022.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_22_length_254_cov_572.112994, whole genome shotgun sequence 254
NZ_JAEUZA010000023.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_23_length_240_cov_386.417178, whole genome shotgun sequence 240
NZ_JAEUZA010000024.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_24_length_235_cov_486.031646, whole genome shotgun sequence 235
NZ_JAEUZA010000025.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_25_length_234_cov_413.611465, whole genome shotgun sequence 234
NZ_JAEUZA010000026.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_26_length_226_cov_422.288591, whole genome shotgun sequence 226
NZ_JAEUZA010000027.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_27_length_225_cov_435.594595, whole genome shotgun sequence 225
NZ_JAEUZA010000028.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_28_length_223_cov_37.205479, whole genome shotgun sequence 223
NZ_JAEUZA010000029.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_29_length_221_cov_436.527778, whole genome shotgun sequence 221
NZ_JAEUZA010000030.1 Alkalicoccobacillus gibsonii strain KCCM 41407 NODE_30_length_219_cov_489.232394, whole genome shotgun sequence 219

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory