fast.genomicscompare 6,575 genera of bacteria & archaea

 

Ponticoccus alexandrii C31

Genome identifier: GCF_016806125.1

NCBI assembly name: ASM1680612v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Ponticoccus, Ponticoccus alexandrii

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Ponticoccus, Ponticoccus alexandrii

Scaffolds: 5

Genes: 4,836 Protein-coding: 4,651 RNAs: 54 pseudogenes: 131

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP047166.1 Ponticoccus alexandrii strain C31 chromosome, complete genome 4,129,092
NZ_CP047167.1 Ponticoccus alexandrii strain C31 plasmid p-SCP1, complete sequence 113,885
NZ_CP047168.1 Ponticoccus alexandrii strain C31 plasmid p-SCP2, complete sequence 132,342
NZ_CP047169.1 Ponticoccus alexandrii strain C31 plasmid p-SCP3 185,074
NZ_CP047170.1 Ponticoccus alexandrii strain C31 plasmid p-SCP4, complete sequence 531,034

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory