fast.genomicscompare 6,575 genera of bacteria & archaea

 

Luteirhabdus pelagi A3-108

Genome identifier: GCF_016827595.1

NCBI assembly name: ASM1682759v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Luteirhabdus, Luteirhabdus pelagi

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Luteirhabdus, Luteirhabdus pelagi

Scaffolds: 57

Genes: 3,113 Protein-coding: 3,066 RNAs: 42 pseudogenes: 5

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAECMS010000001.1 Luteirhabdus pelagi strain A3-108 NODE_1_length_1056819_cov_177.364, whole genome shotgun sequence 1,056,819
NZ_JAECMS010000002.1 Luteirhabdus pelagi strain A3-108 NODE_2_length_950181_cov_190.121, whole genome shotgun sequence 950,181
NZ_JAECMS010000003.1 Luteirhabdus pelagi strain A3-108 NODE_3_length_358351_cov_169.008, whole genome shotgun sequence 358,351
NZ_JAECMS010000004.1 Luteirhabdus pelagi strain A3-108 NODE_4_length_347059_cov_188.038, whole genome shotgun sequence 347,059
NZ_JAECMS010000005.1 Luteirhabdus pelagi strain A3-108 NODE_5_length_345671_cov_171.043, whole genome shotgun sequence 345,671
NZ_JAECMS010000006.1 Luteirhabdus pelagi strain A3-108 NODE_6_length_182752_cov_169.892, whole genome shotgun sequence 182,752
NZ_JAECMS010000007.1 Luteirhabdus pelagi strain A3-108 NODE_7_length_54468_cov_183.773, whole genome shotgun sequence 54,468
NZ_JAECMS010000008.1 Luteirhabdus pelagi strain A3-108 NODE_8_length_14563_cov_144.037, whole genome shotgun sequence 14,563
NZ_JAECMS010000009.1 Luteirhabdus pelagi strain A3-108 NODE_9_length_10795_cov_135.428, whole genome shotgun sequence 10,795
NZ_JAECMS010000010.1 Luteirhabdus pelagi strain A3-108 NODE_10_length_9458_cov_125.889, whole genome shotgun sequence 9,458
NZ_JAECMS010000011.1 Luteirhabdus pelagi strain A3-108 NODE_11_length_7630_cov_123.687, whole genome shotgun sequence 7,630
NZ_JAECMS010000012.1 Luteirhabdus pelagi strain A3-108 NODE_12_length_5577_cov_416.392, whole genome shotgun sequence 5,577
NZ_JAECMS010000013.1 Luteirhabdus pelagi strain A3-108 NODE_13_length_3717_cov_372.426, whole genome shotgun sequence 3,717
NZ_JAECMS010000014.1 Luteirhabdus pelagi strain A3-108 NODE_14_length_3674_cov_129.059, whole genome shotgun sequence 3,674
NZ_JAECMS010000015.1 Luteirhabdus pelagi strain A3-108 NODE_15_length_3418_cov_115.031, whole genome shotgun sequence 3,418
NZ_JAECMS010000016.1 Luteirhabdus pelagi strain A3-108 NODE_16_length_3051_cov_154.575, whole genome shotgun sequence 3,051
NZ_JAECMS010000017.1 Luteirhabdus pelagi strain A3-108 NODE_17_length_3028_cov_148.15, whole genome shotgun sequence 3,028
NZ_JAECMS010000018.1 Luteirhabdus pelagi strain A3-108 NODE_18_length_2846_cov_145.967, whole genome shotgun sequence 2,846
NZ_JAECMS010000019.1 Luteirhabdus pelagi strain A3-108 NODE_19_length_2198_cov_211.124, whole genome shotgun sequence 2,198
NZ_JAECMS010000020.1 Luteirhabdus pelagi strain A3-108 NODE_20_length_2045_cov_193.88, whole genome shotgun sequence 2,045
NZ_JAECMS010000021.1 Luteirhabdus pelagi strain A3-108 NODE_21_length_1780_cov_217.424, whole genome shotgun sequence 1,780
NZ_JAECMS010000022.1 Luteirhabdus pelagi strain A3-108 NODE_22_length_1626_cov_252.043, whole genome shotgun sequence 1,626
NZ_JAECMS010000023.1 Luteirhabdus pelagi strain A3-108 NODE_23_length_1548_cov_126.041, whole genome shotgun sequence 1,548
NZ_JAECMS010000024.1 Luteirhabdus pelagi strain A3-108 NODE_24_length_1303_cov_755.582, whole genome shotgun sequence 1,303
NZ_JAECMS010000025.1 Luteirhabdus pelagi strain A3-108 NODE_25_length_1296_cov_398.441, whole genome shotgun sequence 1,296
NZ_JAECMS010000026.1 Luteirhabdus pelagi strain A3-108 NODE_26_length_1101_cov_255.713, whole genome shotgun sequence 1,101
NZ_JAECMS010000027.1 Luteirhabdus pelagi strain A3-108 NODE_27_length_1094_cov_1806.56, whole genome shotgun sequence 1,094
NZ_JAECMS010000028.1 Luteirhabdus pelagi strain A3-108 NODE_28_length_1035_cov_128.225, whole genome shotgun sequence 1,035
NZ_JAECMS010000029.1 Luteirhabdus pelagi strain A3-108 NODE_29_length_976_cov_294.018, whole genome shotgun sequence 976
NZ_JAECMS010000030.1 Luteirhabdus pelagi strain A3-108 NODE_30_length_954_cov_284.326, whole genome shotgun sequence 954
NZ_JAECMS010000031.1 Luteirhabdus pelagi strain A3-108 NODE_31_length_899_cov_245.109, whole genome shotgun sequence 899
NZ_JAECMS010000032.1 Luteirhabdus pelagi strain A3-108 NODE_32_length_872_cov_265.219, whole genome shotgun sequence 872
NZ_JAECMS010000033.1 Luteirhabdus pelagi strain A3-108 NODE_33_length_872_cov_229.523, whole genome shotgun sequence 872
NZ_JAECMS010000034.1 Luteirhabdus pelagi strain A3-108 NODE_34_length_839_cov_114.505, whole genome shotgun sequence 839
NZ_JAECMS010000035.1 Luteirhabdus pelagi strain A3-108 NODE_35_length_792_cov_140.413, whole genome shotgun sequence 792
NZ_JAECMS010000036.1 Luteirhabdus pelagi strain A3-108 NODE_36_length_766_cov_391.787, whole genome shotgun sequence 766
NZ_JAECMS010000037.1 Luteirhabdus pelagi strain A3-108 NODE_37_length_750_cov_248.963, whole genome shotgun sequence 750
NZ_JAECMS010000038.1 Luteirhabdus pelagi strain A3-108 NODE_38_length_712_cov_300.151, whole genome shotgun sequence 712
NZ_JAECMS010000039.1 Luteirhabdus pelagi strain A3-108 NODE_39_length_680_cov_414.119, whole genome shotgun sequence 680
NZ_JAECMS010000040.1 Luteirhabdus pelagi strain A3-108 NODE_40_length_654_cov_385.601, whole genome shotgun sequence 654
NZ_JAECMS010000041.1 Luteirhabdus pelagi strain A3-108 NODE_41_length_653_cov_158.37, whole genome shotgun sequence 653
NZ_JAECMS010000042.1 Luteirhabdus pelagi strain A3-108 NODE_42_length_641_cov_173.227, whole genome shotgun sequence 641
NZ_JAECMS010000043.1 Luteirhabdus pelagi strain A3-108 NODE_43_length_624_cov_272.592, whole genome shotgun sequence 624
NZ_JAECMS010000044.1 Luteirhabdus pelagi strain A3-108 NODE_44_length_623_cov_285.595, whole genome shotgun sequence 623
NZ_JAECMS010000045.1 Luteirhabdus pelagi strain A3-108 NODE_45_length_570_cov_273.619, whole genome shotgun sequence 570
NZ_JAECMS010000046.1 Luteirhabdus pelagi strain A3-108 NODE_46_length_550_cov_176.564, whole genome shotgun sequence 550
NZ_JAECMS010000047.1 Luteirhabdus pelagi strain A3-108 NODE_47_length_486_cov_338.78, whole genome shotgun sequence 486
NZ_JAECMS010000048.1 Luteirhabdus pelagi strain A3-108 NODE_48_length_469_cov_502.916, whole genome shotgun sequence 469
NZ_JAECMS010000049.1 Luteirhabdus pelagi strain A3-108 NODE_49_length_441_cov_123.797, whole genome shotgun sequence 441
NZ_JAECMS010000050.1 Luteirhabdus pelagi strain A3-108 NODE_50_length_340_cov_130.392, whole genome shotgun sequence 340
NZ_JAECMS010000051.1 Luteirhabdus pelagi strain A3-108 NODE_51_length_278_cov_0.726368, whole genome shotgun sequence 278
NZ_JAECMS010000052.1 Luteirhabdus pelagi strain A3-108 NODE_53_length_261_cov_1.19022, whole genome shotgun sequence 261
NZ_JAECMS010000053.1 Luteirhabdus pelagi strain A3-108 NODE_54_length_259_cov_135.78, whole genome shotgun sequence 259
NZ_JAECMS010000054.1 Luteirhabdus pelagi strain A3-108 NODE_55_length_244_cov_1.7485, whole genome shotgun sequence 244
NZ_JAECMS010000055.1 Luteirhabdus pelagi strain A3-108 NODE_56_length_243_cov_1.01807, whole genome shotgun sequence 243
NZ_JAECMS010000056.1 Luteirhabdus pelagi strain A3-108 NODE_57_length_232_cov_1.88387, whole genome shotgun sequence 232
NZ_JAECMS010000057.1 Luteirhabdus pelagi strain A3-108 NODE_58_length_228_cov_1.93377, whole genome shotgun sequence 228

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory