fast.genomicscompare 6,575 genera of bacteria & archaea

 

Avimicrobium caecorum An564

Genome identifier: GCF_016901815.1

NCBI assembly name: ASM1690181v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, Avimicrobium, Avimicrobium caecorum

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Hydrogenoanaerobacterium, Hydrogenoanaerobacterium saccharovorans

Scaffolds: 66

Genes: 2,353 Protein-coding: 2,221 RNAs: 77 pseudogenes: 55

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACSNR010000001.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_0, whole genome shotgun sequence 473,785
NZ_JACSNR010000002.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_1, whole genome shotgun sequence 275,606
NZ_JACSNR010000003.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_2, whole genome shotgun sequence 224,083
NZ_JACSNR010000004.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_3, whole genome shotgun sequence 215,070
NZ_JACSNR010000005.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_4, whole genome shotgun sequence 200,222
NZ_JACSNR010000006.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_5, whole genome shotgun sequence 173,960
NZ_JACSNR010000007.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_6, whole genome shotgun sequence 166,064
NZ_JACSNR010000008.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_7, whole genome shotgun sequence 164,018
NZ_JACSNR010000009.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_8, whole genome shotgun sequence 135,341
NZ_JACSNR010000010.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_9, whole genome shotgun sequence 112,825
NZ_JACSNR010000011.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_10, whole genome shotgun sequence 82,471
NZ_JACSNR010000012.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_11, whole genome shotgun sequence 31,599
NZ_JACSNR010000013.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_12, whole genome shotgun sequence 18,451
NZ_JACSNR010000014.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_13, whole genome shotgun sequence 16,908
NZ_JACSNR010000015.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_14, whole genome shotgun sequence 9,956
NZ_JACSNR010000016.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_15, whole genome shotgun sequence 6,390
NZ_JACSNR010000017.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_16, whole genome shotgun sequence 5,053
NZ_JACSNR010000018.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_17, whole genome shotgun sequence 3,597
NZ_JACSNR010000019.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_18, whole genome shotgun sequence 3,308
NZ_JACSNR010000020.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_19, whole genome shotgun sequence 3,213
NZ_JACSNR010000021.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_20, whole genome shotgun sequence 2,406
NZ_JACSNR010000022.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_21, whole genome shotgun sequence 2,282
NZ_JACSNR010000023.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_22, whole genome shotgun sequence 1,721
NZ_JACSNR010000024.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_23, whole genome shotgun sequence 1,492
NZ_JACSNR010000025.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_24, whole genome shotgun sequence 1,438
NZ_JACSNR010000026.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_25, whole genome shotgun sequence 1,335
NZ_JACSNR010000027.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_26, whole genome shotgun sequence 1,247
NZ_JACSNR010000028.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_27, whole genome shotgun sequence 1,246
NZ_JACSNR010000029.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_28, whole genome shotgun sequence 1,000
NZ_JACSNR010000030.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_29, whole genome shotgun sequence 719
NZ_JACSNR010000031.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_30, whole genome shotgun sequence 718
NZ_JACSNR010000032.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_31, whole genome shotgun sequence 639
NZ_JACSNR010000033.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_32, whole genome shotgun sequence 639
NZ_JACSNR010000034.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_33, whole genome shotgun sequence 625
NZ_JACSNR010000035.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_34, whole genome shotgun sequence 572
NZ_JACSNR010000036.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_35, whole genome shotgun sequence 546
NZ_JACSNR010000037.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_36, whole genome shotgun sequence 546
NZ_JACSNR010000038.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_37, whole genome shotgun sequence 531
NZ_JACSNR010000039.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_38, whole genome shotgun sequence 472
NZ_JACSNR010000040.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_39, whole genome shotgun sequence 409
NZ_JACSNR010000041.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_40, whole genome shotgun sequence 373
NZ_JACSNR010000042.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_41, whole genome shotgun sequence 360
NZ_JACSNR010000043.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_42, whole genome shotgun sequence 351
NZ_JACSNR010000044.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_43, whole genome shotgun sequence 336
NZ_JACSNR010000045.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_44, whole genome shotgun sequence 334
NZ_JACSNR010000046.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_45, whole genome shotgun sequence 330
NZ_JACSNR010000047.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_46, whole genome shotgun sequence 303
NZ_JACSNR010000048.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_47, whole genome shotgun sequence 303
NZ_JACSNR010000049.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_48, whole genome shotgun sequence 290
NZ_JACSNR010000050.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_49, whole genome shotgun sequence 263
NZ_JACSNR010000051.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_50, whole genome shotgun sequence 261
NZ_JACSNR010000052.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_51, whole genome shotgun sequence 239
NZ_JACSNR010000053.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_52, whole genome shotgun sequence 237
NZ_JACSNR010000054.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_53, whole genome shotgun sequence 235
NZ_JACSNR010000055.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_54, whole genome shotgun sequence 235
NZ_JACSNR010000056.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_55, whole genome shotgun sequence 235
NZ_JACSNR010000057.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_56, whole genome shotgun sequence 233
NZ_JACSNR010000058.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_57, whole genome shotgun sequence 231
NZ_JACSNR010000059.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_58, whole genome shotgun sequence 230
NZ_JACSNR010000060.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_59, whole genome shotgun sequence 230
NZ_JACSNR010000061.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_60, whole genome shotgun sequence 223
NZ_JACSNR010000062.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_61, whole genome shotgun sequence 219
NZ_JACSNR010000063.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_62, whole genome shotgun sequence 219
NZ_JACSNR010000064.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_63, whole genome shotgun sequence 219
NZ_JACSNR010000065.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_64, whole genome shotgun sequence 208
NZ_JACSNR010000066.1 Hydrogenoanaerobacterium saccharovorans strain An564 An564_contig-110_65, whole genome shotgun sequence 202

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory