fast.genomicscompare 6,575 genera of bacteria & archaea

 

Methylopila capsulata DSM 6130

Genome identifier: GCF_016907975.1

NCBI assembly name: ASM1690797v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Methylopilaceae, Methylopila, Methylopila capsulata

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Methylocystaceae, Methylopila, Methylopila capsulata

Scaffolds: 8

Genes: 3,887 Protein-coding: 3,802 RNAs: 54 pseudogenes: 31

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAFBCY010000001.1 Methylopila capsulata strain DSM 6130 Ga0453999_01, whole genome shotgun sequence 1,205,418
NZ_JAFBCY010000002.1 Methylopila capsulata strain DSM 6130 Ga0453999_02, whole genome shotgun sequence 1,177,388
NZ_JAFBCY010000003.1 Methylopila capsulata strain DSM 6130 Ga0453999_03, whole genome shotgun sequence 995,166
NZ_JAFBCY010000004.1 Methylopila capsulata strain DSM 6130 Ga0453999_04, whole genome shotgun sequence 451,457
NZ_JAFBCY010000005.1 Methylopila capsulata strain DSM 6130 Ga0453999_05, whole genome shotgun sequence 280,424
NZ_JAFBCY010000006.1 Methylopila capsulata strain DSM 6130 Ga0453999_06, whole genome shotgun sequence 17,771
NZ_JAFBCY010000007.1 Methylopila capsulata strain DSM 6130 Ga0453999_07, whole genome shotgun sequence 5,881
NZ_JAFBCY010000008.1 Methylopila capsulata strain DSM 6130 Ga0453999_08, whole genome shotgun sequence 1,565

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory