fast.genomicscompare 6,575 genera of bacteria & archaea

 

Halanaerobacter jeridensis DSM 23230

Genome identifier: GCF_016908315.1

NCBI assembly name: ASM1690831v1

GTDB taxonomy: Bacteria, Bacillota_F, Halanaerobiia, Halobacteroidales, Halobacteroidaceae, Halanaerobacter, Halanaerobacter jeridensis

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Halanaerobiales, Halobacteroidaceae, Halanaerobacter, Halanaerobacter jeridensis

Scaffolds: 48

Genes: 3,058 Protein-coding: 2,998 RNAs: 47 pseudogenes: 13

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAFBDQ010000001.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_01, whole genome shotgun sequence 357,961
NZ_JAFBDQ010000002.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_02, whole genome shotgun sequence 305,203
NZ_JAFBDQ010000003.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_03, whole genome shotgun sequence 295,925
NZ_JAFBDQ010000004.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_04, whole genome shotgun sequence 264,641
NZ_JAFBDQ010000005.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_05, whole genome shotgun sequence 257,029
NZ_JAFBDQ010000006.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_06, whole genome shotgun sequence 215,706
NZ_JAFBDQ010000007.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_07, whole genome shotgun sequence 175,421
NZ_JAFBDQ010000008.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_08, whole genome shotgun sequence 141,574
NZ_JAFBDQ010000009.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_09, whole genome shotgun sequence 128,929
NZ_JAFBDQ010000010.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_10, whole genome shotgun sequence 116,563
NZ_JAFBDQ010000011.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_11, whole genome shotgun sequence 113,092
NZ_JAFBDQ010000012.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_12, whole genome shotgun sequence 107,679
NZ_JAFBDQ010000013.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_13, whole genome shotgun sequence 94,884
NZ_JAFBDQ010000014.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_14, whole genome shotgun sequence 94,691
NZ_JAFBDQ010000015.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_15, whole genome shotgun sequence 76,569
NZ_JAFBDQ010000016.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_16, whole genome shotgun sequence 52,162
NZ_JAFBDQ010000017.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_17, whole genome shotgun sequence 51,240
NZ_JAFBDQ010000018.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_18, whole genome shotgun sequence 50,906
NZ_JAFBDQ010000019.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_19, whole genome shotgun sequence 47,367
NZ_JAFBDQ010000020.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_20, whole genome shotgun sequence 47,139
NZ_JAFBDQ010000021.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_21, whole genome shotgun sequence 40,181
NZ_JAFBDQ010000022.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_22, whole genome shotgun sequence 38,574
NZ_JAFBDQ010000023.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_23, whole genome shotgun sequence 37,439
NZ_JAFBDQ010000024.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_24, whole genome shotgun sequence 28,352
NZ_JAFBDQ010000025.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_25, whole genome shotgun sequence 26,283
NZ_JAFBDQ010000026.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_26, whole genome shotgun sequence 18,842
NZ_JAFBDQ010000027.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_27, whole genome shotgun sequence 16,500
NZ_JAFBDQ010000028.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_28, whole genome shotgun sequence 16,038
NZ_JAFBDQ010000029.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_29, whole genome shotgun sequence 15,873
NZ_JAFBDQ010000030.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_30, whole genome shotgun sequence 15,555
NZ_JAFBDQ010000031.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_31, whole genome shotgun sequence 11,179
NZ_JAFBDQ010000032.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_32, whole genome shotgun sequence 9,801
NZ_JAFBDQ010000033.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_33, whole genome shotgun sequence 7,744
NZ_JAFBDQ010000034.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_34, whole genome shotgun sequence 7,595
NZ_JAFBDQ010000035.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_35, whole genome shotgun sequence 7,462
NZ_JAFBDQ010000036.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_36, whole genome shotgun sequence 7,253
NZ_JAFBDQ010000037.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_37, whole genome shotgun sequence 4,774
NZ_JAFBDQ010000038.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_38, whole genome shotgun sequence 4,760
NZ_JAFBDQ010000039.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_39, whole genome shotgun sequence 2,272
NZ_JAFBDQ010000040.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_40, whole genome shotgun sequence 1,824
NZ_JAFBDQ010000041.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_41, whole genome shotgun sequence 1,568
NZ_JAFBDQ010000042.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_42, whole genome shotgun sequence 1,510
NZ_JAFBDQ010000043.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_43, whole genome shotgun sequence 1,492
NZ_JAFBDQ010000044.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_44, whole genome shotgun sequence 1,428
NZ_JAFBDQ010000045.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_45, whole genome shotgun sequence 1,181
NZ_JAFBDQ010000046.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_46, whole genome shotgun sequence 1,165
NZ_JAFBDQ010000047.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_47, whole genome shotgun sequence 1,106
NZ_JAFBDQ010000048.1 Halanaerobacter jeridensis strain DSM 23230 Ga0454029_48, whole genome shotgun sequence 1,105

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory