fast.genomicscompare 6,575 genera of bacteria & archaea

 

Jiella flava CQZ9-1

Genome identifier: GCF_017349315.1

NCBI assembly name: ASM1734931v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Jiella, Jiella flava

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Aurantimonadaceae, Jiella, Jiella flava

Scaffolds: 49

Genes: 3,769 Protein-coding: 3,576 RNAs: 52 pseudogenes: 141

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAFMPP010000001.1 Jiella flava strain CQZ9-1 Scaffold1_1, whole genome shotgun sequence 609,149
NZ_JAFMPP010000002.1 Jiella flava strain CQZ9-1 Scaffold2_1, whole genome shotgun sequence 464,925
NZ_JAFMPP010000003.1 Jiella flava strain CQZ9-1 Scaffold3_1, whole genome shotgun sequence 333,958
NZ_JAFMPP010000004.1 Jiella flava strain CQZ9-1 Scaffold4_1, whole genome shotgun sequence 260,612
NZ_JAFMPP010000005.1 Jiella flava strain CQZ9-1 Scaffold5_1, whole genome shotgun sequence 255,569
NZ_JAFMPP010000006.1 Jiella flava strain CQZ9-1 Scaffold6_1, whole genome shotgun sequence 254,147
NZ_JAFMPP010000007.1 Jiella flava strain CQZ9-1 Scaffold7_1, whole genome shotgun sequence 217,389
NZ_JAFMPP010000008.1 Jiella flava strain CQZ9-1 Scaffold8_1, whole genome shotgun sequence 200,967
NZ_JAFMPP010000009.1 Jiella flava strain CQZ9-1 Scaffold9_1, whole genome shotgun sequence 173,731
NZ_JAFMPP010000010.1 Jiella flava strain CQZ9-1 Scaffold10_1, whole genome shotgun sequence 145,259
NZ_JAFMPP010000011.1 Jiella flava strain CQZ9-1 Scaffold11_1, whole genome shotgun sequence 143,918
NZ_JAFMPP010000012.1 Jiella flava strain CQZ9-1 Scaffold12_1, whole genome shotgun sequence 138,448
NZ_JAFMPP010000013.1 Jiella flava strain CQZ9-1 Scaffold13_1, whole genome shotgun sequence 133,000
NZ_JAFMPP010000014.1 Jiella flava strain CQZ9-1 Scaffold14_1, whole genome shotgun sequence 129,373
NZ_JAFMPP010000015.1 Jiella flava strain CQZ9-1 Scaffold15_1, whole genome shotgun sequence 126,725
NZ_JAFMPP010000016.1 Jiella flava strain CQZ9-1 Scaffold16_1, whole genome shotgun sequence 94,065
NZ_JAFMPP010000017.1 Jiella flava strain CQZ9-1 Scaffold17_1, whole genome shotgun sequence 3,364
NZ_JAFMPP010000018.1 Jiella flava strain CQZ9-1 Scaffold17_2, whole genome shotgun sequence 85,855
NZ_JAFMPP010000019.1 Jiella flava strain CQZ9-1 Scaffold18_1, whole genome shotgun sequence 85,942
NZ_JAFMPP010000020.1 Jiella flava strain CQZ9-1 Scaffold19_1, whole genome shotgun sequence 74,081
NZ_JAFMPP010000021.1 Jiella flava strain CQZ9-1 Scaffold20_1, whole genome shotgun sequence 49,765
NZ_JAFMPP010000022.1 Jiella flava strain CQZ9-1 Scaffold21_1, whole genome shotgun sequence 47,338
NZ_JAFMPP010000023.1 Jiella flava strain CQZ9-1 Scaffold22_1, whole genome shotgun sequence 26,431
NZ_JAFMPP010000024.1 Jiella flava strain CQZ9-1 Scaffold23_1, whole genome shotgun sequence 19,158
NZ_JAFMPP010000025.1 Jiella flava strain CQZ9-1 Scaffold24_1, whole genome shotgun sequence 19,051
NZ_JAFMPP010000026.1 Jiella flava strain CQZ9-1 Scaffold25_1, whole genome shotgun sequence 11,118
NZ_JAFMPP010000027.1 Jiella flava strain CQZ9-1 Scaffold26_1, whole genome shotgun sequence 9,965
NZ_JAFMPP010000028.1 Jiella flava strain CQZ9-1 Scaffold27_1, whole genome shotgun sequence 7,367
NZ_JAFMPP010000029.1 Jiella flava strain CQZ9-1 Scaffold28_1, whole genome shotgun sequence 7,352
NZ_JAFMPP010000030.1 Jiella flava strain CQZ9-1 Scaffold29_1, whole genome shotgun sequence 6,768
NZ_JAFMPP010000031.1 Jiella flava strain CQZ9-1 Scaffold30_1, whole genome shotgun sequence 3,432
NZ_JAFMPP010000032.1 Jiella flava strain CQZ9-1 Scaffold31_1, whole genome shotgun sequence 2,422
NZ_JAFMPP010000033.1 Jiella flava strain CQZ9-1 Scaffold32_1, whole genome shotgun sequence 2,177
NZ_JAFMPP010000034.1 Jiella flava strain CQZ9-1 Scaffold33_1, whole genome shotgun sequence 1,917
NZ_JAFMPP010000035.1 Jiella flava strain CQZ9-1 Scaffold34_1, whole genome shotgun sequence 1,855
NZ_JAFMPP010000036.1 Jiella flava strain CQZ9-1 Scaffold35_1, whole genome shotgun sequence 1,657
NZ_JAFMPP010000037.1 Jiella flava strain CQZ9-1 Scaffold36_1, whole genome shotgun sequence 1,609
NZ_JAFMPP010000038.1 Jiella flava strain CQZ9-1 Scaffold37_1, whole genome shotgun sequence 1,606
NZ_JAFMPP010000039.1 Jiella flava strain CQZ9-1 Scaffold38_1, whole genome shotgun sequence 1,493
NZ_JAFMPP010000040.1 Jiella flava strain CQZ9-1 Scaffold39_1, whole genome shotgun sequence 1,304
NZ_JAFMPP010000041.1 Jiella flava strain CQZ9-1 Scaffold40_1, whole genome shotgun sequence 1,279
NZ_JAFMPP010000042.1 Jiella flava strain CQZ9-1 Scaffold41_1, whole genome shotgun sequence 1,181
NZ_JAFMPP010000043.1 Jiella flava strain CQZ9-1 Scaffold42_1, whole genome shotgun sequence 1,170
NZ_JAFMPP010000044.1 Jiella flava strain CQZ9-1 Scaffold43_1, whole genome shotgun sequence 1,162
NZ_JAFMPP010000045.1 Jiella flava strain CQZ9-1 Scaffold44_1, whole genome shotgun sequence 894
NZ_JAFMPP010000046.1 Jiella flava strain CQZ9-1 Scaffold45_1, whole genome shotgun sequence 839
NZ_JAFMPP010000047.1 Jiella flava strain CQZ9-1 Scaffold46_1, whole genome shotgun sequence 788
NZ_JAFMPP010000048.1 Jiella flava strain CQZ9-1 Scaffold47_1, whole genome shotgun sequence 783
NZ_JAFMPP010000049.1 Jiella flava strain CQZ9-1 Scaffold48_1, whole genome shotgun sequence 575

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory