fast.genomicscompare 6,575 genera of bacteria & archaea

 

Arenibaculum pallidiluteum SYSU D00532

Genome identifier: GCF_017355985.1

NCBI assembly name: ASM1735598v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Azospirillales, Azospirillaceae, Arenibaculum, Arenibaculum pallidiluteum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Azospirillaceae, Arenibaculum, Arenibaculum pallidiluteum

Scaffolds: 55

Genes: 6,239 Protein-coding: 6,132 RNAs: 64 pseudogenes: 43

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAFIQU010000001.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_1_length_842400_cov_18.126062, whole genome shotgun sequence 842,400
NZ_JAFIQU010000002.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_2_length_673023_cov_17.974639, whole genome shotgun sequence 673,023
NZ_JAFIQU010000003.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_3_length_597216_cov_18.173682, whole genome shotgun sequence 597,216
NZ_JAFIQU010000004.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_4_length_404964_cov_18.196646, whole genome shotgun sequence 404,964
NZ_JAFIQU010000005.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_5_length_384902_cov_18.814778, whole genome shotgun sequence 384,902
NZ_JAFIQU010000006.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_6_length_375360_cov_17.891875, whole genome shotgun sequence 375,360
NZ_JAFIQU010000007.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_7_length_251402_cov_17.469160, whole genome shotgun sequence 251,402
NZ_JAFIQU010000008.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_8_length_230862_cov_18.032816, whole genome shotgun sequence 230,862
NZ_JAFIQU010000009.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_9_length_195592_cov_18.095492, whole genome shotgun sequence 195,592
NZ_JAFIQU010000010.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_10_length_195306_cov_18.954907, whole genome shotgun sequence 195,306
NZ_JAFIQU010000011.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_11_length_194694_cov_18.230883, whole genome shotgun sequence 194,694
NZ_JAFIQU010000012.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_12_length_179172_cov_19.146697, whole genome shotgun sequence 179,172
NZ_JAFIQU010000013.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_13_length_167809_cov_18.379728, whole genome shotgun sequence 167,809
NZ_JAFIQU010000014.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_14_length_164887_cov_18.145050, whole genome shotgun sequence 164,887
NZ_JAFIQU010000015.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_15_length_162453_cov_17.766913, whole genome shotgun sequence 162,453
NZ_JAFIQU010000016.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_16_length_149915_cov_17.666286, whole genome shotgun sequence 149,915
NZ_JAFIQU010000017.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_17_length_145107_cov_18.067247, whole genome shotgun sequence 145,107
NZ_JAFIQU010000018.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_18_length_142363_cov_18.049187, whole genome shotgun sequence 142,363
NZ_JAFIQU010000019.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_19_length_136465_cov_18.567908, whole genome shotgun sequence 136,465
NZ_JAFIQU010000020.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_20_length_124769_cov_17.868752, whole genome shotgun sequence 124,769
NZ_JAFIQU010000021.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_21_length_97617_cov_18.483738, whole genome shotgun sequence 97,617
NZ_JAFIQU010000022.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_22_length_88317_cov_18.886589, whole genome shotgun sequence 88,317
NZ_JAFIQU010000023.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_23_length_85657_cov_19.064569, whole genome shotgun sequence 85,657
NZ_JAFIQU010000024.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_24_length_83916_cov_19.199315, whole genome shotgun sequence 83,916
NZ_JAFIQU010000025.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_25_length_67824_cov_18.306444, whole genome shotgun sequence 67,824
NZ_JAFIQU010000026.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_26_length_64629_cov_18.240548, whole genome shotgun sequence 64,629
NZ_JAFIQU010000027.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_27_length_60399_cov_18.049146, whole genome shotgun sequence 60,399
NZ_JAFIQU010000028.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_28_length_57432_cov_18.511797, whole genome shotgun sequence 57,432
NZ_JAFIQU010000029.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_29_length_54018_cov_17.934284, whole genome shotgun sequence 54,018
NZ_JAFIQU010000030.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_30_length_45378_cov_17.505001, whole genome shotgun sequence 45,378
NZ_JAFIQU010000031.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_31_length_35057_cov_18.832361, whole genome shotgun sequence 35,057
NZ_JAFIQU010000032.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_32_length_24489_cov_18.556393, whole genome shotgun sequence 24,489
NZ_JAFIQU010000033.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_33_length_6167_cov_19.245475, whole genome shotgun sequence 6,167
NZ_JAFIQU010000034.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_34_length_4937_cov_19.519183, whole genome shotgun sequence 4,937
NZ_JAFIQU010000035.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_35_length_2755_cov_114.696663, whole genome shotgun sequence 2,755
NZ_JAFIQU010000036.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_36_length_2226_cov_20.089846, whole genome shotgun sequence 2,226
NZ_JAFIQU010000037.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_37_length_1567_cov_33.680650, whole genome shotgun sequence 1,567
NZ_JAFIQU010000038.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_38_length_1505_cov_123.770480, whole genome shotgun sequence 1,505
NZ_JAFIQU010000039.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_39_length_1485_cov_20.830229, whole genome shotgun sequence 1,485
NZ_JAFIQU010000040.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_40_length_1404_cov_84.978707, whole genome shotgun sequence 1,404
NZ_JAFIQU010000041.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_41_length_1131_cov_40.406910, whole genome shotgun sequence 1,131
NZ_JAFIQU010000042.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_42_length_1057_cov_40.704545, whole genome shotgun sequence 1,057
NZ_JAFIQU010000043.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_43_length_939_cov_37.204706, whole genome shotgun sequence 939
NZ_JAFIQU010000044.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_44_length_906_cov_36.910649, whole genome shotgun sequence 906
NZ_JAFIQU010000045.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_45_length_827_cov_34.710027, whole genome shotgun sequence 827
NZ_JAFIQU010000046.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_46_length_772_cov_38.477306, whole genome shotgun sequence 772
NZ_JAFIQU010000047.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_47_length_748_cov_36.993930, whole genome shotgun sequence 748
NZ_JAFIQU010000048.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_48_length_716_cov_38.609250, whole genome shotgun sequence 716
NZ_JAFIQU010000049.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_49_length_714_cov_32.920000, whole genome shotgun sequence 714
NZ_JAFIQU010000050.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_50_length_675_cov_31.259386, whole genome shotgun sequence 675
NZ_JAFIQU010000051.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_51_length_667_cov_39.911765, whole genome shotgun sequence 667
NZ_JAFIQU010000052.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_52_length_535_cov_29.737668, whole genome shotgun sequence 535
NZ_JAFIQU010000053.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_53_length_526_cov_36.784897, whole genome shotgun sequence 526
NZ_JAFIQU010000054.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_54_length_511_cov_38.545024, whole genome shotgun sequence 511
NZ_JAFIQU010000055.1 Arenibaculum pallidiluteum strain SYSU D00532 NODE_55_length_498_cov_19.596577, whole genome shotgun sequence 498

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory