fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADNYK01 sp017810075 WGM2

Genome identifier: GCF_017810075.1

NCBI assembly name: ASM1781007v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, JADNYK01, JADNYK01 sp017810075

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Pseudozobellia

Scaffolds: 69

Genes: 3,975 Protein-coding: 3,860 RNAs: 44 pseudogenes: 71

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JADNYK010000001.1 Pseudozobellia sp. WGM2 NODE_1_length_813325_cov_74.536703, whole genome shotgun sequence 813,325
NZ_JADNYK010000002.1 Pseudozobellia sp. WGM2 NODE_2_length_793001_cov_76.445314, whole genome shotgun sequence 793,001
NZ_JADNYK010000003.1 Pseudozobellia sp. WGM2 NODE_3_length_721990_cov_75.386888, whole genome shotgun sequence 721,990
NZ_JADNYK010000004.1 Pseudozobellia sp. WGM2 NODE_4_length_674489_cov_75.148542, whole genome shotgun sequence 674,489
NZ_JADNYK010000005.1 Pseudozobellia sp. WGM2 NODE_5_length_453861_cov_75.764703, whole genome shotgun sequence 453,861
NZ_JADNYK010000006.1 Pseudozobellia sp. WGM2 NODE_6_length_245804_cov_76.266938, whole genome shotgun sequence 245,804
NZ_JADNYK010000007.1 Pseudozobellia sp. WGM2 NODE_7_length_240497_cov_76.804308, whole genome shotgun sequence 240,497
NZ_JADNYK010000008.1 Pseudozobellia sp. WGM2 NODE_8_length_202116_cov_76.043175, whole genome shotgun sequence 202,116
NZ_JADNYK010000009.1 Pseudozobellia sp. WGM2 NODE_9_length_170351_cov_75.641678, whole genome shotgun sequence 170,351
NZ_JADNYK010000010.1 Pseudozobellia sp. WGM2 NODE_10_length_114785_cov_75.991132, whole genome shotgun sequence 114,785
NZ_JADNYK010000011.1 Pseudozobellia sp. WGM2 NODE_11_length_113166_cov_77.481431, whole genome shotgun sequence 113,166
NZ_JADNYK010000012.1 Pseudozobellia sp. WGM2 NODE_12_length_81410_cov_75.528637, whole genome shotgun sequence 81,410
NZ_JADNYK010000013.1 Pseudozobellia sp. WGM2 NODE_13_length_9699_cov_74.992396, whole genome shotgun sequence 9,699
NZ_JADNYK010000014.1 Pseudozobellia sp. WGM2 NODE_14_length_9219_cov_78.036732, whole genome shotgun sequence 9,219
NZ_JADNYK010000015.1 Pseudozobellia sp. WGM2 NODE_15_length_8464_cov_90.175732, whole genome shotgun sequence 8,464
NZ_JADNYK010000016.1 Pseudozobellia sp. WGM2 NODE_16_length_5940_cov_80.940935, whole genome shotgun sequence 5,940
NZ_JADNYK010000017.1 Pseudozobellia sp. WGM2 NODE_17_length_3588_cov_79.525652, whole genome shotgun sequence 3,588
NZ_JADNYK010000018.1 Pseudozobellia sp. WGM2 NODE_18_length_3157_cov_294.748528, whole genome shotgun sequence 3,157
NZ_JADNYK010000019.1 Pseudozobellia sp. WGM2 NODE_19_length_3122_cov_51.817731, whole genome shotgun sequence 3,122
NZ_JADNYK010000020.1 Pseudozobellia sp. WGM2 NODE_20_length_3084_cov_121.079397, whole genome shotgun sequence 3,084
NZ_JADNYK010000021.1 Pseudozobellia sp. WGM2 NODE_21_length_2088_cov_83.024133, whole genome shotgun sequence 2,088
NZ_JADNYK010000022.1 Pseudozobellia sp. WGM2 NODE_22_length_1740_cov_117.765387, whole genome shotgun sequence 1,740
NZ_JADNYK010000023.1 Pseudozobellia sp. WGM2 NODE_23_length_1472_cov_408.486526, whole genome shotgun sequence 1,472
NZ_JADNYK010000024.1 Pseudozobellia sp. WGM2 NODE_24_length_1434_cov_308.977528, whole genome shotgun sequence 1,434
NZ_JADNYK010000025.1 Pseudozobellia sp. WGM2 NODE_25_length_1379_cov_298.457031, whole genome shotgun sequence 1,379
NZ_JADNYK010000026.1 Pseudozobellia sp. WGM2 NODE_26_length_1249_cov_154.493913, whole genome shotgun sequence 1,249
NZ_JADNYK010000027.1 Pseudozobellia sp. WGM2 NODE_27_length_1168_cov_83.923293, whole genome shotgun sequence 1,168
NZ_JADNYK010000028.1 Pseudozobellia sp. WGM2 NODE_28_length_999_cov_105.562222, whole genome shotgun sequence 999
NZ_JADNYK010000029.1 Pseudozobellia sp. WGM2 NODE_29_length_986_cov_152.521984, whole genome shotgun sequence 986
NZ_JADNYK010000030.1 Pseudozobellia sp. WGM2 NODE_30_length_835_cov_190.879076, whole genome shotgun sequence 835
NZ_JADNYK010000031.1 Pseudozobellia sp. WGM2 NODE_31_length_700_cov_73.544093, whole genome shotgun sequence 700
NZ_JADNYK010000032.1 Pseudozobellia sp. WGM2 NODE_32_length_666_cov_78.936508, whole genome shotgun sequence 666
NZ_JADNYK010000033.1 Pseudozobellia sp. WGM2 NODE_33_length_640_cov_245.539741, whole genome shotgun sequence 640
NZ_JADNYK010000034.1 Pseudozobellia sp. WGM2 NODE_34_length_624_cov_165.760000, whole genome shotgun sequence 624
NZ_JADNYK010000035.1 Pseudozobellia sp. WGM2 NODE_35_length_577_cov_84.374477, whole genome shotgun sequence 577
NZ_JADNYK010000036.1 Pseudozobellia sp. WGM2 NODE_36_length_543_cov_81.671171, whole genome shotgun sequence 543
NZ_JADNYK010000037.1 Pseudozobellia sp. WGM2 NODE_37_length_540_cov_72.696145, whole genome shotgun sequence 540
NZ_JADNYK010000038.1 Pseudozobellia sp. WGM2 NODE_38_length_532_cov_71.482679, whole genome shotgun sequence 532
NZ_JADNYK010000039.1 Pseudozobellia sp. WGM2 NODE_39_length_517_cov_77.727273, whole genome shotgun sequence 517
NZ_JADNYK010000040.1 Pseudozobellia sp. WGM2 NODE_40_length_517_cov_0.921053, whole genome shotgun sequence 517
NZ_JADNYK010000041.1 Pseudozobellia sp. WGM2 NODE_41_length_510_cov_0.978102, whole genome shotgun sequence 510
NZ_JADNYK010000042.1 Pseudozobellia sp. WGM2 NODE_42_length_510_cov_0.922141, whole genome shotgun sequence 510
NZ_JADNYK010000043.1 Pseudozobellia sp. WGM2 NODE_43_length_499_cov_0.825000, whole genome shotgun sequence 499
NZ_JADNYK010000044.1 Pseudozobellia sp. WGM2 NODE_44_length_497_cov_152.695980, whole genome shotgun sequence 497
NZ_JADNYK010000045.1 Pseudozobellia sp. WGM2 NODE_45_length_491_cov_1.336735, whole genome shotgun sequence 491
NZ_JADNYK010000046.1 Pseudozobellia sp. WGM2 NODE_46_length_473_cov_1.441176, whole genome shotgun sequence 473
NZ_JADNYK010000047.1 Pseudozobellia sp. WGM2 NODE_47_length_470_cov_0.964960, whole genome shotgun sequence 470
NZ_JADNYK010000048.1 Pseudozobellia sp. WGM2 NODE_48_length_458_cov_0.796657, whole genome shotgun sequence 458
NZ_JADNYK010000049.1 Pseudozobellia sp. WGM2 NODE_49_length_455_cov_0.932584, whole genome shotgun sequence 455
NZ_JADNYK010000050.1 Pseudozobellia sp. WGM2 NODE_50_length_452_cov_0.963173, whole genome shotgun sequence 452
NZ_JADNYK010000051.1 Pseudozobellia sp. WGM2 NODE_51_length_450_cov_0.965812, whole genome shotgun sequence 450
NZ_JADNYK010000052.1 Pseudozobellia sp. WGM2 NODE_52_length_445_cov_135.283237, whole genome shotgun sequence 445
NZ_JADNYK010000053.1 Pseudozobellia sp. WGM2 NODE_53_length_441_cov_0.961988, whole genome shotgun sequence 441
NZ_JADNYK010000054.1 Pseudozobellia sp. WGM2 NODE_54_length_436_cov_1.103858, whole genome shotgun sequence 436
NZ_JADNYK010000055.1 Pseudozobellia sp. WGM2 NODE_55_length_433_cov_1.005988, whole genome shotgun sequence 433
NZ_JADNYK010000056.1 Pseudozobellia sp. WGM2 NODE_56_length_427_cov_81.134146, whole genome shotgun sequence 427
NZ_JADNYK010000057.1 Pseudozobellia sp. WGM2 NODE_57_length_422_cov_0.894737, whole genome shotgun sequence 422
NZ_JADNYK010000058.1 Pseudozobellia sp. WGM2 NODE_58_length_403_cov_0.917763, whole genome shotgun sequence 403
NZ_JADNYK010000059.1 Pseudozobellia sp. WGM2 NODE_59_length_393_cov_95.734694, whole genome shotgun sequence 393
NZ_JADNYK010000060.1 Pseudozobellia sp. WGM2 NODE_60_length_339_cov_70.366667, whole genome shotgun sequence 339
NZ_JADNYK010000061.1 Pseudozobellia sp. WGM2 NODE_61_length_328_cov_82.506550, whole genome shotgun sequence 328
NZ_JADNYK010000062.1 Pseudozobellia sp. WGM2 NODE_62_length_325_cov_160.694690, whole genome shotgun sequence 325
NZ_JADNYK010000063.1 Pseudozobellia sp. WGM2 NODE_63_length_271_cov_45.918605, whole genome shotgun sequence 271
NZ_JADNYK010000064.1 Pseudozobellia sp. WGM2 NODE_64_length_265_cov_80.150602, whole genome shotgun sequence 265
NZ_JADNYK010000065.1 Pseudozobellia sp. WGM2 NODE_65_length_263_cov_60.634146, whole genome shotgun sequence 263
NZ_JADNYK010000066.1 Pseudozobellia sp. WGM2 NODE_66_length_244_cov_81.048276, whole genome shotgun sequence 244
NZ_JADNYK010000067.1 Pseudozobellia sp. WGM2 NODE_67_length_239_cov_68.900000, whole genome shotgun sequence 239
NZ_JADNYK010000068.1 Pseudozobellia sp. WGM2 NODE_68_length_232_cov_53.977444, whole genome shotgun sequence 232
NZ_JADNYK010000069.1 Pseudozobellia sp. WGM2 NODE_69_length_218_cov_78.941176, whole genome shotgun sequence 218

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory