fast.genomicscompare 6,575 genera of bacteria & archaea

 

Motiliproteus sediminis HS6

Genome identifier: GCF_017912535.1

NCBI assembly name: ASM1791253v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Nitrincolaceae, Motiliproteus, Motiliproteus sediminis

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Oceanospirillales, Oceanospirillaceae, Motiliproteus, Motiliproteus sediminis

Scaffolds: 23

Genes: 3,572 Protein-coding: 3,415 RNAs: 74 pseudogenes: 83

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAERQK010000001.1 Motiliproteus sediminis strain HS6 NODE_1_length_905940_cov_39.9963, whole genome shotgun sequence 905,940
NZ_JAERQK010000002.1 Motiliproteus sediminis strain HS6 NODE_2_length_496400_cov_67.7621, whole genome shotgun sequence 496,400
NZ_JAERQK010000003.1 Motiliproteus sediminis strain HS6 NODE_3_length_453073_cov_44.8392, whole genome shotgun sequence 453,073
NZ_JAERQK010000004.1 Motiliproteus sediminis strain HS6 NODE_4_length_276281_cov_61.6428, whole genome shotgun sequence 276,281
NZ_JAERQK010000005.1 Motiliproteus sediminis strain HS6 NODE_5_length_208919_cov_48.8854, whole genome shotgun sequence 208,919
NZ_JAERQK010000006.1 Motiliproteus sediminis strain HS6 NODE_6_length_201374_cov_73.8083, whole genome shotgun sequence 201,374
NZ_JAERQK010000007.1 Motiliproteus sediminis strain HS6 NODE_7_length_183068_cov_74.3493, whole genome shotgun sequence 183,068
NZ_JAERQK010000008.1 Motiliproteus sediminis strain HS6 NODE_8_length_177616_cov_56.9119, whole genome shotgun sequence 177,616
NZ_JAERQK010000009.1 Motiliproteus sediminis strain HS6 NODE_9_length_170403_cov_53.5335, whole genome shotgun sequence 170,403
NZ_JAERQK010000010.1 Motiliproteus sediminis strain HS6 NODE_10_length_165145_cov_54.1014, whole genome shotgun sequence 165,145
NZ_JAERQK010000011.1 Motiliproteus sediminis strain HS6 NODE_11_length_117133_cov_81.8428, whole genome shotgun sequence 117,133
NZ_JAERQK010000012.1 Motiliproteus sediminis strain HS6 NODE_12_length_106571_cov_67.1388, whole genome shotgun sequence 106,571
NZ_JAERQK010000013.1 Motiliproteus sediminis strain HS6 NODE_13_length_74173_cov_79.3302, whole genome shotgun sequence 74,173
NZ_JAERQK010000014.1 Motiliproteus sediminis strain HS6 NODE_14_length_50131_cov_55.4298, whole genome shotgun sequence 50,131
NZ_JAERQK010000015.1 Motiliproteus sediminis strain HS6 NODE_15_length_31268_cov_69.2105, whole genome shotgun sequence 31,268
NZ_JAERQK010000016.1 Motiliproteus sediminis strain HS6 NODE_16_length_24332_cov_77.5542, whole genome shotgun sequence 24,332
NZ_JAERQK010000017.1 Motiliproteus sediminis strain HS6 NODE_17_length_10925_cov_41.0056, whole genome shotgun sequence 10,925
NZ_JAERQK010000018.1 Motiliproteus sediminis strain HS6 NODE_18_length_9009_cov_53.4476, whole genome shotgun sequence 9,009
NZ_JAERQK010000019.1 Motiliproteus sediminis strain HS6 NODE_19_length_3804_cov_50.6853, whole genome shotgun sequence 3,804
NZ_JAERQK010000020.1 Motiliproteus sediminis strain HS6 NODE_20_length_3327_cov_315.764, whole genome shotgun sequence 3,327
NZ_JAERQK010000021.1 Motiliproteus sediminis strain HS6 NODE_21_length_2257_cov_114.856, whole genome shotgun sequence 2,257
NZ_JAERQK010000022.1 Motiliproteus sediminis strain HS6 NODE_25_length_1603_cov_331.005, whole genome shotgun sequence 1,603
NZ_JAERQK010000023.1 Motiliproteus sediminis strain HS6 NODE_27_length_1234_cov_109.137, whole genome shotgun sequence 1,234

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory