fast.genomicscompare 6,575 genera of bacteria & archaea

 

Marivibrio halodurans CGMCC 1.15697

Genome identifier: GCF_017963645.1

NCBI assembly name: ASM1796364v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, UBA8366, GCA-2696645, Marivibrio, Marivibrio halodurans

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Rhodospirillaceae, Marivibrio, Marivibrio halodurans

Scaffolds: 22

Genes: 3,845 Protein-coding: 3,726 RNAs: 52 pseudogenes: 67

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAGMWN010000001.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_1_length_998447_cov_281.506333, whole genome shotgun sequence 998,447
NZ_JAGMWN010000002.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_2_length_516546_cov_303.984826, whole genome shotgun sequence 516,546
NZ_JAGMWN010000003.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_3_length_486235_cov_288.280956, whole genome shotgun sequence 486,235
NZ_JAGMWN010000004.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_4_length_437596_cov_298.046060, whole genome shotgun sequence 437,596
NZ_JAGMWN010000005.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_5_length_379879_cov_295.095313, whole genome shotgun sequence 379,879
NZ_JAGMWN010000006.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_6_length_359915_cov_315.793607, whole genome shotgun sequence 359,915
NZ_JAGMWN010000007.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_7_length_158325_cov_302.351676, whole genome shotgun sequence 158,325
NZ_JAGMWN010000008.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_8_length_135680_cov_306.464886, whole genome shotgun sequence 135,680
NZ_JAGMWN010000009.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_9_length_131302_cov_313.140469, whole genome shotgun sequence 131,302
NZ_JAGMWN010000010.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_10_length_120807_cov_314.164491, whole genome shotgun sequence 120,807
NZ_JAGMWN010000011.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_11_length_106287_cov_309.563770, whole genome shotgun sequence 106,287
NZ_JAGMWN010000012.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_12_length_102964_cov_312.085628, whole genome shotgun sequence 102,964
NZ_JAGMWN010000013.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_13_length_102781_cov_310.376918, whole genome shotgun sequence 102,781
NZ_JAGMWN010000014.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_14_length_100835_cov_308.406641, whole genome shotgun sequence 100,835
NZ_JAGMWN010000015.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_15_length_18046_cov_299.114364, whole genome shotgun sequence 18,046
NZ_JAGMWN010000016.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_16_length_9660_cov_297.166336, whole genome shotgun sequence 9,660
NZ_JAGMWN010000017.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_17_length_5939_cov_579.337427, whole genome shotgun sequence 5,939
NZ_JAGMWN010000018.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_18_length_5795_cov_298.461525, whole genome shotgun sequence 5,795
NZ_JAGMWN010000019.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_19_length_2228_cov_329.668526, whole genome shotgun sequence 2,228
NZ_JAGMWN010000020.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_20_length_1358_cov_1195.992194, whole genome shotgun sequence 1,358
NZ_JAGMWN010000021.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_21_length_1166_cov_1263.136823, whole genome shotgun sequence 1,166
NZ_JAGMWN010000022.1 Marivibrio halodurans strain CGMCC 1.15697 NODE_22_length_578_cov_620.455090, whole genome shotgun sequence 578

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory