fast.genomicscompare 6,575 genera of bacteria & archaea

 

Geoanaerobacter pelophilus DSM 12255

Genome identifier: GCF_018476885.1

NCBI assembly name: ASM1847688v1

GTDB taxonomy: Bacteria, Desulfobacterota, Desulfuromonadia, Geobacterales, DSM-12255, Geoanaerobacter, Geoanaerobacter pelophilus

NCBI taxonomy: Bacteria, Thermodesulfobacteriota, Desulfuromonadia, Geobacterales, Geobacteraceae, Geoanaerobacter, Geoanaerobacter pelophilus

Scaffolds: 42

Genes: 4,083 Protein-coding: 4,000 RNAs: 64 pseudogenes: 19

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAHCVJ010000001.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_1_length_1181372_cov_112.058292, whole genome shotgun sequence 1,181,372
NZ_JAHCVJ010000002.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_3_length_592237_cov_117.762525, whole genome shotgun sequence 592,237
NZ_JAHCVJ010000003.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_4_length_511291_cov_111.749154, whole genome shotgun sequence 511,291
NZ_JAHCVJ010000004.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_6_length_412344_cov_113.258274, whole genome shotgun sequence 412,344
NZ_JAHCVJ010000005.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_7_length_399243_cov_117.278245, whole genome shotgun sequence 399,243
NZ_JAHCVJ010000006.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_9_length_363772_cov_116.807443, whole genome shotgun sequence 363,772
NZ_JAHCVJ010000007.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_14_length_203148_cov_113.465542, whole genome shotgun sequence 203,148
NZ_JAHCVJ010000008.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_15_length_159933_cov_127.810479, whole genome shotgun sequence 159,933
NZ_JAHCVJ010000009.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_19_length_154067_cov_112.331431, whole genome shotgun sequence 154,067
NZ_JAHCVJ010000010.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_25_length_104419_cov_118.778900, whole genome shotgun sequence 104,419
NZ_JAHCVJ010000011.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_27_length_75724_cov_105.154018, whole genome shotgun sequence 75,724
NZ_JAHCVJ010000012.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_28_length_74013_cov_108.699416, whole genome shotgun sequence 74,013
NZ_JAHCVJ010000013.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_29_length_73696_cov_119.986050, whole genome shotgun sequence 73,696
NZ_JAHCVJ010000014.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_32_length_47291_cov_104.415279, whole genome shotgun sequence 47,291
NZ_JAHCVJ010000015.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_36_length_23586_cov_106.162704, whole genome shotgun sequence 23,586
NZ_JAHCVJ010000016.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_38_length_15645_cov_106.413605, whole genome shotgun sequence 15,645
NZ_JAHCVJ010000017.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_39_length_10074_cov_121.352706, whole genome shotgun sequence 10,074
NZ_JAHCVJ010000018.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_40_length_8379_cov_124.745724, whole genome shotgun sequence 8,379
NZ_JAHCVJ010000019.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_42_length_5668_cov_103.025935, whole genome shotgun sequence 5,668
NZ_JAHCVJ010000020.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_43_length_5311_cov_276.289454, whole genome shotgun sequence 5,311
NZ_JAHCVJ010000021.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_44_length_3956_cov_144.848930, whole genome shotgun sequence 3,956
NZ_JAHCVJ010000022.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_45_length_3100_cov_114.484949, whole genome shotgun sequence 3,100
NZ_JAHCVJ010000023.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_46_length_2032_cov_125.326854, whole genome shotgun sequence 2,032
NZ_JAHCVJ010000024.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_49_length_1046_cov_389.453044, whole genome shotgun sequence 1,046
NZ_JAHCVJ010000025.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_50_length_952_cov_92.277714, whole genome shotgun sequence 952
NZ_JAHCVJ010000026.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_51_length_895_cov_208.944988, whole genome shotgun sequence 895
NZ_JAHCVJ010000027.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_53_length_826_cov_207.246996, whole genome shotgun sequence 826
NZ_JAHCVJ010000028.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_54_length_753_cov_195.646450, whole genome shotgun sequence 753
NZ_JAHCVJ010000029.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_57_length_614_cov_233.968343, whole genome shotgun sequence 614
NZ_JAHCVJ010000030.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_58_length_613_cov_397.636194, whole genome shotgun sequence 613
NZ_JAHCVJ010000031.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_59_length_543_cov_226.407725, whole genome shotgun sequence 543
NZ_JAHCVJ010000032.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_60_length_497_cov_398.378571, whole genome shotgun sequence 497
NZ_JAHCVJ010000033.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_62_length_483_cov_206.500000, whole genome shotgun sequence 483
NZ_JAHCVJ010000034.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_65_length_462_cov_257.202597, whole genome shotgun sequence 462
NZ_JAHCVJ010000035.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_66_length_437_cov_261.386111, whole genome shotgun sequence 437
NZ_JAHCVJ010000036.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_67_length_421_cov_203.220930, whole genome shotgun sequence 421
NZ_JAHCVJ010000037.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_70_length_386_cov_369.359223, whole genome shotgun sequence 386
NZ_JAHCVJ010000038.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_74_length_326_cov_382.883534, whole genome shotgun sequence 326
NZ_JAHCVJ010000039.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_75_length_259_cov_288.329670, whole genome shotgun sequence 259
NZ_JAHCVJ010000040.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_81_length_231_cov_392.181818, whole genome shotgun sequence 231
NZ_JAHCVJ010000041.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_82_length_230_cov_414.274510, whole genome shotgun sequence 230
NZ_JAHCVJ010000042.1 Geoanaerobacter pelophilus strain DSM 12255 NODE_84_length_222_cov_397.351724, whole genome shotgun sequence 222

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory