fast.genomicscompare 6,575 genera of bacteria & archaea

 

Clostridioides_A sp002390935 N8

Genome identifier: GCF_018917235.1

NCBI assembly name: ASM1891723v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Peptostreptococcales, Peptostreptococcaceae, Clostridioides_A, Clostridioides_A sp002390935

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Peptostreptococcaceae, Clostridioides, Clostridioides mangenotii

Scaffolds: 25

Genes: 2,821 Protein-coding: 2,700 RNAs: 100 pseudogenes: 21

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAHLOF010000001.1 Metaclostridioides mangenotii strain N8 No8_ctg0001, whole genome shotgun sequence 708,046
NZ_JAHLOF010000002.1 Metaclostridioides mangenotii strain N8 No8_ctg0002, whole genome shotgun sequence 464,484
NZ_JAHLOF010000003.1 Metaclostridioides mangenotii strain N8 No8_ctg0003, whole genome shotgun sequence 381,451
NZ_JAHLOF010000004.1 Metaclostridioides mangenotii strain N8 No8_ctg0004, whole genome shotgun sequence 257,071
NZ_JAHLOF010000005.1 Metaclostridioides mangenotii strain N8 No8_ctg0005, whole genome shotgun sequence 239,083
NZ_JAHLOF010000006.1 Metaclostridioides mangenotii strain N8 No8_ctg0006, whole genome shotgun sequence 237,415
NZ_JAHLOF010000007.1 Metaclostridioides mangenotii strain N8 No8_ctg0007, whole genome shotgun sequence 138,318
NZ_JAHLOF010000008.1 Metaclostridioides mangenotii strain N8 No8_ctg0008, whole genome shotgun sequence 85,844
NZ_JAHLOF010000009.1 Metaclostridioides mangenotii strain N8 No8_ctg0009, whole genome shotgun sequence 71,827
NZ_JAHLOF010000010.1 Metaclostridioides mangenotii strain N8 No8_ctg0010, whole genome shotgun sequence 70,255
NZ_JAHLOF010000011.1 Metaclostridioides mangenotii strain N8 No8_ctg0011, whole genome shotgun sequence 45,778
NZ_JAHLOF010000012.1 Metaclostridioides mangenotii strain N8 No8_ctg0012, whole genome shotgun sequence 42,011
NZ_JAHLOF010000013.1 Metaclostridioides mangenotii strain N8 No8_ctg0013, whole genome shotgun sequence 35,458
NZ_JAHLOF010000014.1 Metaclostridioides mangenotii strain N8 No8_ctg0014, whole genome shotgun sequence 32,456
NZ_JAHLOF010000015.1 Metaclostridioides mangenotii strain N8 No8_ctg0015, whole genome shotgun sequence 30,107
NZ_JAHLOF010000016.1 Metaclostridioides mangenotii strain N8 No8_ctg0016, whole genome shotgun sequence 12,734
NZ_JAHLOF010000017.1 Metaclostridioides mangenotii strain N8 No8_ctg0017, whole genome shotgun sequence 3,028
NZ_JAHLOF010000018.1 Metaclostridioides mangenotii strain N8 No8_ctg0018, whole genome shotgun sequence 1,434
NZ_JAHLOF010000019.1 Metaclostridioides mangenotii strain N8 No8_ctg0019, whole genome shotgun sequence 2,404
NZ_JAHLOF010000020.1 Metaclostridioides mangenotii strain N8 No8_ctg0020, whole genome shotgun sequence 2,144
NZ_JAHLOF010000021.1 Metaclostridioides mangenotii strain N8 No8_ctg0022, whole genome shotgun sequence 1,850
NZ_JAHLOF010000022.1 Metaclostridioides mangenotii strain N8 No8_ctg0024, whole genome shotgun sequence 1,197
NZ_JAHLOF010000023.1 Metaclostridioides mangenotii strain N8 No8_ctg0044, whole genome shotgun sequence 640
NZ_JAHLOF010000024.1 Metaclostridioides mangenotii strain N8 No8_ctg0091, whole genome shotgun sequence 520
NZ_JAHLOF010000025.1 Metaclostridioides mangenotii strain N8 No8_ctg0097, whole genome shotgun sequence 508

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory