fast.genomicscompare 6,575 genera of bacteria & archaea

 

Tissierella_C simiarum MSJ-40

Genome identifier: GCF_018917865.1

NCBI assembly name: ASM1891786v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Tissierellales, Tissierellaceae, Tissierella_C, Tissierella_C simiarum

NCBI taxonomy: Bacteria, Bacillota, Tissierellia, Tissierellales, Tissierellaceae, Tissierella, Tissierella simiarum

Scaffolds: 52

Genes: 4,176 Protein-coding: 3,922 RNAs: 71 pseudogenes: 183

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAHLPM010000001.1 Tissierella simiarum strain MSJ-40 M40_ctg0001, whole genome shotgun sequence 494,699
NZ_JAHLPM010000002.1 Tissierella simiarum strain MSJ-40 M40_ctg0002, whole genome shotgun sequence 411,650
NZ_JAHLPM010000003.1 Tissierella simiarum strain MSJ-40 M40_ctg0003, whole genome shotgun sequence 311,626
NZ_JAHLPM010000004.1 Tissierella simiarum strain MSJ-40 M40_ctg0004, whole genome shotgun sequence 251,112
NZ_JAHLPM010000005.1 Tissierella simiarum strain MSJ-40 M40_ctg0005, whole genome shotgun sequence 212,685
NZ_JAHLPM010000006.1 Tissierella simiarum strain MSJ-40 M40_ctg0006, whole genome shotgun sequence 199,541
NZ_JAHLPM010000007.1 Tissierella simiarum strain MSJ-40 M40_ctg0007, whole genome shotgun sequence 199,075
NZ_JAHLPM010000008.1 Tissierella simiarum strain MSJ-40 M40_ctg0008, whole genome shotgun sequence 194,781
NZ_JAHLPM010000009.1 Tissierella simiarum strain MSJ-40 M40_ctg0009, whole genome shotgun sequence 193,770
NZ_JAHLPM010000010.1 Tissierella simiarum strain MSJ-40 M40_ctg0010, whole genome shotgun sequence 177,523
NZ_JAHLPM010000011.1 Tissierella simiarum strain MSJ-40 M40_ctg0011, whole genome shotgun sequence 150,783
NZ_JAHLPM010000012.1 Tissierella simiarum strain MSJ-40 M40_ctg0012, whole genome shotgun sequence 142,307
NZ_JAHLPM010000013.1 Tissierella simiarum strain MSJ-40 M40_ctg0013, whole genome shotgun sequence 95,401
NZ_JAHLPM010000014.1 Tissierella simiarum strain MSJ-40 M40_ctg0014, whole genome shotgun sequence 91,193
NZ_JAHLPM010000015.1 Tissierella simiarum strain MSJ-40 M40_ctg0015, whole genome shotgun sequence 87,719
NZ_JAHLPM010000016.1 Tissierella simiarum strain MSJ-40 M40_ctg0016, whole genome shotgun sequence 86,132
NZ_JAHLPM010000017.1 Tissierella simiarum strain MSJ-40 M40_ctg0017, whole genome shotgun sequence 85,207
NZ_JAHLPM010000018.1 Tissierella simiarum strain MSJ-40 M40_ctg0018, whole genome shotgun sequence 75,231
NZ_JAHLPM010000019.1 Tissierella simiarum strain MSJ-40 M40_ctg0019, whole genome shotgun sequence 72,474
NZ_JAHLPM010000020.1 Tissierella simiarum strain MSJ-40 M40_ctg0020, whole genome shotgun sequence 68,741
NZ_JAHLPM010000021.1 Tissierella simiarum strain MSJ-40 M40_ctg0021, whole genome shotgun sequence 51,596
NZ_JAHLPM010000022.1 Tissierella simiarum strain MSJ-40 M40_ctg0022, whole genome shotgun sequence 49,855
NZ_JAHLPM010000023.1 Tissierella simiarum strain MSJ-40 M40_ctg0023, whole genome shotgun sequence 46,389
NZ_JAHLPM010000024.1 Tissierella simiarum strain MSJ-40 M40_ctg0024, whole genome shotgun sequence 39,539
NZ_JAHLPM010000025.1 Tissierella simiarum strain MSJ-40 M40_ctg0025, whole genome shotgun sequence 38,332
NZ_JAHLPM010000026.1 Tissierella simiarum strain MSJ-40 M40_ctg0026, whole genome shotgun sequence 34,054
NZ_JAHLPM010000027.1 Tissierella simiarum strain MSJ-40 M40_ctg0027, whole genome shotgun sequence 33,652
NZ_JAHLPM010000028.1 Tissierella simiarum strain MSJ-40 M40_ctg0028, whole genome shotgun sequence 29,957
NZ_JAHLPM010000029.1 Tissierella simiarum strain MSJ-40 M40_ctg0029, whole genome shotgun sequence 25,345
NZ_JAHLPM010000030.1 Tissierella simiarum strain MSJ-40 M40_ctg0030, whole genome shotgun sequence 24,430
NZ_JAHLPM010000031.1 Tissierella simiarum strain MSJ-40 M40_ctg0032, whole genome shotgun sequence 21,843
NZ_JAHLPM010000032.1 Tissierella simiarum strain MSJ-40 M40_ctg0033, whole genome shotgun sequence 16,842
NZ_JAHLPM010000033.1 Tissierella simiarum strain MSJ-40 M40_ctg0034, whole genome shotgun sequence 16,006
NZ_JAHLPM010000034.1 Tissierella simiarum strain MSJ-40 M40_ctg0035, whole genome shotgun sequence 11,270
NZ_JAHLPM010000035.1 Tissierella simiarum strain MSJ-40 M40_ctg0036, whole genome shotgun sequence 10,482
NZ_JAHLPM010000036.1 Tissierella simiarum strain MSJ-40 M40_ctg0037, whole genome shotgun sequence 8,961
NZ_JAHLPM010000037.1 Tissierella simiarum strain MSJ-40 M40_ctg0039, whole genome shotgun sequence 3,065
NZ_JAHLPM010000038.1 Tissierella simiarum strain MSJ-40 M40_ctg0040, whole genome shotgun sequence 1,610
NZ_JAHLPM010000039.1 Tissierella simiarum strain MSJ-40 M40_ctg0044, whole genome shotgun sequence 2,897
NZ_JAHLPM010000040.1 Tissierella simiarum strain MSJ-40 M40_ctg0048, whole genome shotgun sequence 2,580
NZ_JAHLPM010000041.1 Tissierella simiarum strain MSJ-40 M40_ctg0052, whole genome shotgun sequence 2,360
NZ_JAHLPM010000042.1 Tissierella simiarum strain MSJ-40 M40_ctg0053, whole genome shotgun sequence 2,052
NZ_JAHLPM010000043.1 Tissierella simiarum strain MSJ-40 M40_ctg0057, whole genome shotgun sequence 1,714
NZ_JAHLPM010000044.1 Tissierella simiarum strain MSJ-40 M40_ctg0059, whole genome shotgun sequence 1,696
NZ_JAHLPM010000045.1 Tissierella simiarum strain MSJ-40 M40_ctg0060, whole genome shotgun sequence 1,695
NZ_JAHLPM010000046.1 Tissierella simiarum strain MSJ-40 M40_ctg0067, whole genome shotgun sequence 1,558
NZ_JAHLPM010000047.1 Tissierella simiarum strain MSJ-40 M40_ctg0069, whole genome shotgun sequence 1,521
NZ_JAHLPM010000048.1 Tissierella simiarum strain MSJ-40 M40_ctg0073, whole genome shotgun sequence 1,374
NZ_JAHLPM010000049.1 Tissierella simiarum strain MSJ-40 M40_ctg0075, whole genome shotgun sequence 1,334
NZ_JAHLPM010000050.1 Tissierella simiarum strain MSJ-40 M40_ctg0115, whole genome shotgun sequence 819
NZ_JAHLPM010000051.1 Tissierella simiarum strain MSJ-40 M40_ctg0142, whole genome shotgun sequence 742
NZ_JAHLPM010000052.1 Tissierella simiarum strain MSJ-40 M40_ctg0188, whole genome shotgun sequence 677

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory