fast.genomicscompare 6,575 genera of bacteria & archaea

 

CAG-194 sp018917935 MSJ-39

Genome identifier: GCF_018917935.1

NCBI assembly name: ASM1891793v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, CAG-194, CAG-194 sp018917935

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Kineothrix

Scaffolds: 55

Genes: 2,756 Protein-coding: 2,661 RNAs: 71 pseudogenes: 24

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAHLPN010000001.1 Kineothrix sp. MSJ-39 L-50_ctg001, whole genome shotgun sequence 363,230
NZ_JAHLPN010000002.1 Kineothrix sp. MSJ-39 L-50_ctg002, whole genome shotgun sequence 338,750
NZ_JAHLPN010000003.1 Kineothrix sp. MSJ-39 L-50_ctg003, whole genome shotgun sequence 190,069
NZ_JAHLPN010000004.1 Kineothrix sp. MSJ-39 L-50_ctg004, whole genome shotgun sequence 142,228
NZ_JAHLPN010000005.1 Kineothrix sp. MSJ-39 L-50_ctg005, whole genome shotgun sequence 141,861
NZ_JAHLPN010000006.1 Kineothrix sp. MSJ-39 L-50_ctg006, whole genome shotgun sequence 139,312
NZ_JAHLPN010000007.1 Kineothrix sp. MSJ-39 L-50_ctg007, whole genome shotgun sequence 137,303
NZ_JAHLPN010000008.1 Kineothrix sp. MSJ-39 L-50_ctg008, whole genome shotgun sequence 120,435
NZ_JAHLPN010000009.1 Kineothrix sp. MSJ-39 L-50_ctg009, whole genome shotgun sequence 115,460
NZ_JAHLPN010000010.1 Kineothrix sp. MSJ-39 L-50_ctg010, whole genome shotgun sequence 112,581
NZ_JAHLPN010000011.1 Kineothrix sp. MSJ-39 L-50_ctg011, whole genome shotgun sequence 104,065
NZ_JAHLPN010000012.1 Kineothrix sp. MSJ-39 L-50_ctg012, whole genome shotgun sequence 99,082
NZ_JAHLPN010000013.1 Kineothrix sp. MSJ-39 L-50_ctg013, whole genome shotgun sequence 97,962
NZ_JAHLPN010000014.1 Kineothrix sp. MSJ-39 L-50_ctg014, whole genome shotgun sequence 89,535
NZ_JAHLPN010000015.1 Kineothrix sp. MSJ-39 L-50_ctg015, whole genome shotgun sequence 64,571
NZ_JAHLPN010000016.1 Kineothrix sp. MSJ-39 L-50_ctg016, whole genome shotgun sequence 63,727
NZ_JAHLPN010000017.1 Kineothrix sp. MSJ-39 L-50_ctg017, whole genome shotgun sequence 63,549
NZ_JAHLPN010000018.1 Kineothrix sp. MSJ-39 L-50_ctg018, whole genome shotgun sequence 57,824
NZ_JAHLPN010000019.1 Kineothrix sp. MSJ-39 L-50_ctg019, whole genome shotgun sequence 57,226
NZ_JAHLPN010000020.1 Kineothrix sp. MSJ-39 L-50_ctg020, whole genome shotgun sequence 55,027
NZ_JAHLPN010000021.1 Kineothrix sp. MSJ-39 L-50_ctg021, whole genome shotgun sequence 53,678
NZ_JAHLPN010000022.1 Kineothrix sp. MSJ-39 L-50_ctg022, whole genome shotgun sequence 51,609
NZ_JAHLPN010000023.1 Kineothrix sp. MSJ-39 L-50_ctg023, whole genome shotgun sequence 50,305
NZ_JAHLPN010000024.1 Kineothrix sp. MSJ-39 L-50_ctg024, whole genome shotgun sequence 44,405
NZ_JAHLPN010000025.1 Kineothrix sp. MSJ-39 L-50_ctg025, whole genome shotgun sequence 31,666
NZ_JAHLPN010000026.1 Kineothrix sp. MSJ-39 L-50_ctg026, whole genome shotgun sequence 30,050
NZ_JAHLPN010000027.1 Kineothrix sp. MSJ-39 L-50_ctg027, whole genome shotgun sequence 27,656
NZ_JAHLPN010000028.1 Kineothrix sp. MSJ-39 L-50_ctg028, whole genome shotgun sequence 26,387
NZ_JAHLPN010000029.1 Kineothrix sp. MSJ-39 L-50_ctg029, whole genome shotgun sequence 18,668
NZ_JAHLPN010000030.1 Kineothrix sp. MSJ-39 L-50_ctg030, whole genome shotgun sequence 15,038
NZ_JAHLPN010000031.1 Kineothrix sp. MSJ-39 L-50_ctg031, whole genome shotgun sequence 13,818
NZ_JAHLPN010000032.1 Kineothrix sp. MSJ-39 L-50_ctg032, whole genome shotgun sequence 13,732
NZ_JAHLPN010000033.1 Kineothrix sp. MSJ-39 L-50_ctg033, whole genome shotgun sequence 10,390
NZ_JAHLPN010000034.1 Kineothrix sp. MSJ-39 L-50_ctg034, whole genome shotgun sequence 8,298
NZ_JAHLPN010000035.1 Kineothrix sp. MSJ-39 L-50_ctg035, whole genome shotgun sequence 7,152
NZ_JAHLPN010000036.1 Kineothrix sp. MSJ-39 L-50_ctg036, whole genome shotgun sequence 6,706
NZ_JAHLPN010000037.1 Kineothrix sp. MSJ-39 L-50_ctg037, whole genome shotgun sequence 1,662
NZ_JAHLPN010000038.1 Kineothrix sp. MSJ-39 L-50_ctg038, whole genome shotgun sequence 2,678
NZ_JAHLPN010000039.1 Kineothrix sp. MSJ-39 L-50_ctg039, whole genome shotgun sequence 3,959
NZ_JAHLPN010000040.1 Kineothrix sp. MSJ-39 L-50_ctg041, whole genome shotgun sequence 1,840
NZ_JAHLPN010000041.1 Kineothrix sp. MSJ-39 L-50_ctg042, whole genome shotgun sequence 1,824
NZ_JAHLPN010000042.1 Kineothrix sp. MSJ-39 L-50_ctg043, whole genome shotgun sequence 1,776
NZ_JAHLPN010000043.1 Kineothrix sp. MSJ-39 L-50_ctg045, whole genome shotgun sequence 1,624
NZ_JAHLPN010000044.1 Kineothrix sp. MSJ-39 L-50_ctg046, whole genome shotgun sequence 1,476
NZ_JAHLPN010000045.1 Kineothrix sp. MSJ-39 L-50_ctg048, whole genome shotgun sequence 1,467
NZ_JAHLPN010000046.1 Kineothrix sp. MSJ-39 L-50_ctg049, whole genome shotgun sequence 1,424
NZ_JAHLPN010000047.1 Kineothrix sp. MSJ-39 L-50_ctg050, whole genome shotgun sequence 1,172
NZ_JAHLPN010000048.1 Kineothrix sp. MSJ-39 L-50_ctg051, whole genome shotgun sequence 1,135
NZ_JAHLPN010000049.1 Kineothrix sp. MSJ-39 L-50_ctg052, whole genome shotgun sequence 1,069
NZ_JAHLPN010000050.1 Kineothrix sp. MSJ-39 L-50_ctg053, whole genome shotgun sequence 1,040
NZ_JAHLPN010000051.1 Kineothrix sp. MSJ-39 L-50_ctg054, whole genome shotgun sequence 981
NZ_JAHLPN010000052.1 Kineothrix sp. MSJ-39 L-50_ctg055, whole genome shotgun sequence 800
NZ_JAHLPN010000053.1 Kineothrix sp. MSJ-39 L-50_ctg056, whole genome shotgun sequence 759
NZ_JAHLPN010000054.1 Kineothrix sp. MSJ-39 L-50_ctg060, whole genome shotgun sequence 580
NZ_JAHLPN010000055.1 Kineothrix sp. MSJ-39 L-50_ctg061, whole genome shotgun sequence 549

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory