fast.genomicscompare 6,575 genera of bacteria & archaea

 

Metalachnospira sp900553995 MSJ-24

Genome identifier: GCF_018918145.1

NCBI assembly name: ASM1891814v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Anaerotignaceae, Metalachnospira, Metalachnospira sp900553995

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Anaerotignum

Scaffolds: 11

Genes: 2,245 Protein-coding: 2,167 RNAs: 56 pseudogenes: 22

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAHLPX010000001.1 Anaerotignum sp. MSJ-24 M-24_ctg0003, whole genome shotgun sequence 375,966
NZ_JAHLPX010000002.1 Anaerotignum sp. MSJ-24 M-24_ctg0028, whole genome shotgun sequence 97,098
NZ_JAHLPX010000003.1 Anaerotignum sp. MSJ-24 M-24_ctg0006, whole genome shotgun sequence 182,782
NZ_JAHLPX010000004.1 Anaerotignum sp. MSJ-24 M-24_ctg0004, whole genome shotgun sequence 241,299
NZ_JAHLPX010000005.1 Anaerotignum sp. MSJ-24 M-24_ctg0002, whole genome shotgun sequence 383,247
NZ_JAHLPX010000006.1 Anaerotignum sp. MSJ-24 M-24_ctg0093, whole genome shotgun sequence 17,401
NZ_JAHLPX010000007.1 Anaerotignum sp. MSJ-24 M-24_ctg0001, whole genome shotgun sequence 559,077
NZ_JAHLPX010000008.1 Anaerotignum sp. MSJ-24 M-24_ctg0041, whole genome shotgun sequence 82,501
NZ_JAHLPX010000009.1 Anaerotignum sp. MSJ-24 M-24_ctg0014, whole genome shotgun sequence 131,618
NZ_JAHLPX010000010.1 Anaerotignum sp. MSJ-24 M-24_ctg0060, whole genome shotgun sequence 50,010
NZ_JAHLPX010000011.1 Anaerotignum sp. MSJ-24 M-24_ctg0009, whole genome shotgun sequence 171,125

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory