fast.genomicscompare 6,575 genera of bacteria & archaea

 

Clostridium_AW mobile MSJ-11

Genome identifier: GCF_018918285.1

NCBI assembly name: ASM1891828v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Clostridiales, Clostridiaceae, Clostridium_AW, Clostridium_AW mobile

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Clostridiaceae, Clostridium, Clostridium mobile

Scaffolds: 18

Genes: 4,041 Protein-coding: 3,808 RNAs: 109 pseudogenes: 124

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAHLQF010000001.1 Clostridium mobile strain MSJ-11 M-11_ctg001, whole genome shotgun sequence 1,207,678
NZ_JAHLQF010000002.1 Clostridium mobile strain MSJ-11 M-11_ctg002, whole genome shotgun sequence 1,137,742
NZ_JAHLQF010000003.1 Clostridium mobile strain MSJ-11 M-11_ctg003, whole genome shotgun sequence 765,222
NZ_JAHLQF010000004.1 Clostridium mobile strain MSJ-11 M-11_ctg004, whole genome shotgun sequence 618,205
NZ_JAHLQF010000005.1 Clostridium mobile strain MSJ-11 M-11_ctg005, whole genome shotgun sequence 156,699
NZ_JAHLQF010000006.1 Clostridium mobile strain MSJ-11 M-11_ctg006, whole genome shotgun sequence 51,964
NZ_JAHLQF010000007.1 Clostridium mobile strain MSJ-11 M-11_ctg007, whole genome shotgun sequence 40,795
NZ_JAHLQF010000008.1 Clostridium mobile strain MSJ-11 M-11_ctg008, whole genome shotgun sequence 10,186
NZ_JAHLQF010000009.1 Clostridium mobile strain MSJ-11 M-11_ctg009, whole genome shotgun sequence 6,821
NZ_JAHLQF010000010.1 Clostridium mobile strain MSJ-11 M-11_ctg010, whole genome shotgun sequence 6,198
NZ_JAHLQF010000011.1 Clostridium mobile strain MSJ-11 M-11_ctg011, whole genome shotgun sequence 1,602
NZ_JAHLQF010000012.1 Clostridium mobile strain MSJ-11 M-11_ctg012, whole genome shotgun sequence 2,865
NZ_JAHLQF010000013.1 Clostridium mobile strain MSJ-11 M-11_ctg013, whole genome shotgun sequence 2,198
NZ_JAHLQF010000014.1 Clostridium mobile strain MSJ-11 M-11_ctg014, whole genome shotgun sequence 2,146
NZ_JAHLQF010000015.1 Clostridium mobile strain MSJ-11 M-11_ctg016, whole genome shotgun sequence 1,676
NZ_JAHLQF010000016.1 Clostridium mobile strain MSJ-11 M-11_ctg019, whole genome shotgun sequence 938
NZ_JAHLQF010000017.1 Clostridium mobile strain MSJ-11 M-11_ctg021, whole genome shotgun sequence 727
NZ_JAHLQF010000018.1 Clostridium mobile strain MSJ-11 M-11_ctg023, whole genome shotgun sequence 583

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory