fast.genomicscompare 6,575 genera of bacteria & archaea

 

Alkaliphilus_B flagellatus MSJ-5

Genome identifier: GCF_018919215.1

NCBI assembly name: ASM1891921v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Peptostreptococcales, Natronincolaceae, Alkaliphilus_B, Alkaliphilus_B flagellatus

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Clostridiaceae, Alkaliphilus, Alkaliphilus flagellatus

Scaffolds: 30

Genes: 3,584 Protein-coding: 3,479 RNAs: 67 pseudogenes: 38

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAHLQK010000001.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold1, whole genome shotgun sequence 1,059,145
NZ_JAHLQK010000002.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold2, whole genome shotgun sequence 577,163
NZ_JAHLQK010000003.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold3, whole genome shotgun sequence 534,169
NZ_JAHLQK010000004.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold4, whole genome shotgun sequence 495,516
NZ_JAHLQK010000005.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold5, whole genome shotgun sequence 343,231
NZ_JAHLQK010000006.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold6, whole genome shotgun sequence 319,893
NZ_JAHLQK010000007.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold7, whole genome shotgun sequence 104,832
NZ_JAHLQK010000008.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold8, whole genome shotgun sequence 73,375
NZ_JAHLQK010000009.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold9, whole genome shotgun sequence 50,156
NZ_JAHLQK010000010.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold10, whole genome shotgun sequence 16,230
NZ_JAHLQK010000011.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold11, whole genome shotgun sequence 4,570
NZ_JAHLQK010000012.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold12, whole genome shotgun sequence 2,972
NZ_JAHLQK010000013.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold13, whole genome shotgun sequence 2,866
NZ_JAHLQK010000014.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold14, whole genome shotgun sequence 2,499
NZ_JAHLQK010000015.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold15, whole genome shotgun sequence 1,808
NZ_JAHLQK010000016.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold16, whole genome shotgun sequence 1,568
NZ_JAHLQK010000017.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold21, whole genome shotgun sequence 977
NZ_JAHLQK010000018.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold22, whole genome shotgun sequence 966
NZ_JAHLQK010000019.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold25, whole genome shotgun sequence 885
NZ_JAHLQK010000020.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold26, whole genome shotgun sequence 841
NZ_JAHLQK010000021.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold30, whole genome shotgun sequence 734
NZ_JAHLQK010000022.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold32, whole genome shotgun sequence 652
NZ_JAHLQK010000023.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold34, whole genome shotgun sequence 606
NZ_JAHLQK010000024.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold39, whole genome shotgun sequence 530
NZ_JAHLQK010000025.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold40, whole genome shotgun sequence 524
NZ_JAHLQK010000026.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold43, whole genome shotgun sequence 520
NZ_JAHLQK010000027.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold47, whole genome shotgun sequence 510
NZ_JAHLQK010000028.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold48, whole genome shotgun sequence 506
NZ_JAHLQK010000029.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold49, whole genome shotgun sequence 505
NZ_JAHLQK010000030.1 Alkaliphilus flagellatus strain MSJ-5 Scaffold50, whole genome shotgun sequence 502

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory