fast.genomicscompare 6,575 genera of bacteria & archaea

 

Polymorphobacter_B megasporae PAMC 29362

Genome identifier: GCF_018982885.2

NCBI assembly name: ASM1898288v2

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Polymorphobacter_B, Polymorphobacter_B megasporae

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingosinicellaceae, Polymorphobacter, Polymorphobacter megasporae

Scaffolds: 3

Genes: 4,540 Protein-coding: 4,399 RNAs: 52 pseudogenes: 89

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP081848.1 Polymorphobacter megasporae strain PAMC 29362 chromosome, complete genome 3,952,582
NZ_CP081849.1 Polymorphobacter megasporae strain PAMC 29362 plasmid p29362-2, complete sequence 906,785
NZ_CP081850.1 Polymorphobacter megasporae strain PAMC 29362 plasmid p29362-3, complete sequence 35,356

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory