fast.genomicscompare 6,575 genera of bacteria & archaea

 

Thalassococcus_B arenae CAU 1522

Genome identifier: GCF_019104745.1

NCBI assembly name: ASM1910474v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Thalassococcus_B, Thalassococcus_B arenae

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Thalassococcus, Thalassococcus arenae

Scaffolds: 5

Genes: 3,675 Protein-coding: 3,571 RNAs: 50 pseudogenes: 54

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAHRWL010000001.1 Thalassococcus arenae strain CAU 1522 contig1, whole genome shotgun sequence 2,252,324
NZ_JAHRWL010000002.1 Thalassococcus arenae strain CAU 1522 contig2, whole genome shotgun sequence 1,167,102
NZ_JAHRWL010000003.1 Thalassococcus arenae strain CAU 1522 contig3, whole genome shotgun sequence 208,972
NZ_JAHRWL010000004.1 Thalassococcus arenae strain CAU 1522 contig4, whole genome shotgun sequence 76,595
NZ_JAHRWL010000005.1 Thalassococcus arenae strain CAU 1522 contig5, whole genome shotgun sequence 1,457

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory