fast.genomicscompare 6,575 genera of bacteria & archaea

 

Aquisediminimonas profunda DS48-3

Genome identifier: GCF_019443285.1

NCBI assembly name: ASM1944328v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Aquisediminimonas, Aquisediminimonas profunda

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Aquisediminimonas, Aquisediminimonas profunda

Scaffolds: 1

Genes: 3,347 Protein-coding: 3,279 RNAs: 50 pseudogenes: 18

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP080327.1 Aquisediminimonas profunda strain DS48-3 chromosome, complete genome 3,406,525

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory