fast.genomicscompare 6,575 genera of bacteria & archaea

 

Clostridium_AP sp000509125 Q4

Genome identifier: GCF_019597925.1

NCBI assembly name: ASM1959792v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Clostridium_AP, Clostridium_AP sp000509125

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Lachnoclostridium, [Clostridium] scindens

Scaffolds: 1

Genes: 3,797 Protein-coding: 3,672 RNAs: 73 pseudogenes: 52

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP080442.1 [Clostridium] scindens strain Q4 chromosome, complete genome 3,941,835

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory