fast.genomicscompare 6,575 genera of bacteria & archaea

 

Sphingomonas_I nostoxanthinifaciens AK-PDB1-5

Genome identifier: GCF_019930585.1

NCBI assembly name: ASM1993058v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sphingomonas_I, Sphingomonas_I nostoxanthinifaciens

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sphingomonas, Sphingomonas nostoxanthinifaciens

Scaffolds: 1

Genes: 4,139 Protein-coding: 4,041 RNAs: 60 pseudogenes: 38

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP082839.1 Sphingomonas nostoxanthinifaciens strain AK-PDB1-5 chromosome, complete genome 4,298,284

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory