fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAIOUP01 sp019931165 xch1

Genome identifier: GCF_019931165.1

NCBI assembly name: ASM1993116v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Tissierellales, Tepidimicrobiaceae, JAIOUP01, JAIOUP01 sp019931165

NCBI taxonomy: Bacteria, Bacillota, Tissierellia, Tissierellales, Tepidimicrobiaceae, Schnuerera

Scaffolds: 45

Genes: 2,510 Protein-coding: 2,444 RNAs: 54 pseudogenes: 12

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAIOUP010000001.1 Schnuerera sp. xch1 NODE_1_length_452024_cov_227.503712, whole genome shotgun sequence 452,024
NZ_JAIOUP010000002.1 Schnuerera sp. xch1 NODE_2_length_314465_cov_269.744993, whole genome shotgun sequence 314,465
NZ_JAIOUP010000003.1 Schnuerera sp. xch1 NODE_3_length_175982_cov_290.044962, whole genome shotgun sequence 175,982
NZ_JAIOUP010000004.1 Schnuerera sp. xch1 NODE_4_length_122932_cov_361.544430, whole genome shotgun sequence 122,932
NZ_JAIOUP010000005.1 Schnuerera sp. xch1 NODE_5_length_120266_cov_413.837847, whole genome shotgun sequence 120,266
NZ_JAIOUP010000006.1 Schnuerera sp. xch1 NODE_6_length_116266_cov_329.622959, whole genome shotgun sequence 116,266
NZ_JAIOUP010000007.1 Schnuerera sp. xch1 NODE_7_length_111395_cov_352.413958, whole genome shotgun sequence 111,395
NZ_JAIOUP010000008.1 Schnuerera sp. xch1 NODE_8_length_105844_cov_391.243800, whole genome shotgun sequence 105,844
NZ_JAIOUP010000009.1 Schnuerera sp. xch1 NODE_9_length_103259_cov_380.881210, whole genome shotgun sequence 103,259
NZ_JAIOUP010000010.1 Schnuerera sp. xch1 NODE_10_length_96611_cov_345.728624, whole genome shotgun sequence 96,611
NZ_JAIOUP010000011.1 Schnuerera sp. xch1 NODE_11_length_86727_cov_237.257773, whole genome shotgun sequence 86,727
NZ_JAIOUP010000012.1 Schnuerera sp. xch1 NODE_12_length_80986_cov_408.796648, whole genome shotgun sequence 80,986
NZ_JAIOUP010000013.1 Schnuerera sp. xch1 NODE_13_length_74613_cov_307.907199, whole genome shotgun sequence 74,613
NZ_JAIOUP010000014.1 Schnuerera sp. xch1 NODE_14_length_63782_cov_263.813249, whole genome shotgun sequence 63,782
NZ_JAIOUP010000015.1 Schnuerera sp. xch1 NODE_15_length_52152_cov_304.044916, whole genome shotgun sequence 52,152
NZ_JAIOUP010000016.1 Schnuerera sp. xch1 NODE_16_length_49010_cov_406.715407, whole genome shotgun sequence 49,010
NZ_JAIOUP010000017.1 Schnuerera sp. xch1 NODE_17_length_46115_cov_232.596507, whole genome shotgun sequence 46,115
NZ_JAIOUP010000018.1 Schnuerera sp. xch1 NODE_18_length_44137_cov_381.431071, whole genome shotgun sequence 44,137
NZ_JAIOUP010000019.1 Schnuerera sp. xch1 NODE_19_length_43218_cov_379.211168, whole genome shotgun sequence 43,218
NZ_JAIOUP010000020.1 Schnuerera sp. xch1 NODE_20_length_42651_cov_318.281439, whole genome shotgun sequence 42,651
NZ_JAIOUP010000021.1 Schnuerera sp. xch1 NODE_21_length_42393_cov_366.008177, whole genome shotgun sequence 42,393
NZ_JAIOUP010000022.1 Schnuerera sp. xch1 NODE_22_length_37654_cov_305.559890, whole genome shotgun sequence 37,654
NZ_JAIOUP010000023.1 Schnuerera sp. xch1 NODE_23_length_27038_cov_263.219428, whole genome shotgun sequence 27,038
NZ_JAIOUP010000024.1 Schnuerera sp. xch1 NODE_24_length_17567_cov_329.808005, whole genome shotgun sequence 17,567
NZ_JAIOUP010000025.1 Schnuerera sp. xch1 NODE_25_length_16273_cov_391.077118, whole genome shotgun sequence 16,273
NZ_JAIOUP010000026.1 Schnuerera sp. xch1 NODE_26_length_13219_cov_248.168011, whole genome shotgun sequence 13,219
NZ_JAIOUP010000027.1 Schnuerera sp. xch1 NODE_27_length_11800_cov_275.308368, whole genome shotgun sequence 11,800
NZ_JAIOUP010000028.1 Schnuerera sp. xch1 NODE_28_length_9965_cov_305.532362, whole genome shotgun sequence 9,965
NZ_JAIOUP010000029.1 Schnuerera sp. xch1 NODE_29_length_9121_cov_314.243697, whole genome shotgun sequence 9,121
NZ_JAIOUP010000030.1 Schnuerera sp. xch1 NODE_30_length_8957_cov_412.321059, whole genome shotgun sequence 8,957
NZ_JAIOUP010000031.1 Schnuerera sp. xch1 NODE_31_length_7448_cov_351.167684, whole genome shotgun sequence 7,448
NZ_JAIOUP010000032.1 Schnuerera sp. xch1 NODE_32_length_3591_cov_725.021628, whole genome shotgun sequence 3,591
NZ_JAIOUP010000033.1 Schnuerera sp. xch1 NODE_33_length_2335_cov_1242.706377, whole genome shotgun sequence 2,335
NZ_JAIOUP010000034.1 Schnuerera sp. xch1 NODE_34_length_2146_cov_390.768487, whole genome shotgun sequence 2,146
NZ_JAIOUP010000035.1 Schnuerera sp. xch1 NODE_35_length_1944_cov_671.630959, whole genome shotgun sequence 1,944
NZ_JAIOUP010000036.1 Schnuerera sp. xch1 NODE_36_length_1703_cov_542.659902, whole genome shotgun sequence 1,703
NZ_JAIOUP010000037.1 Schnuerera sp. xch1 NODE_37_length_1527_cov_1087.786207, whole genome shotgun sequence 1,527
NZ_JAIOUP010000038.1 Schnuerera sp. xch1 NODE_38_length_1382_cov_332.114176, whole genome shotgun sequence 1,382
NZ_JAIOUP010000039.1 Schnuerera sp. xch1 NODE_41_length_1094_cov_5.730580, whole genome shotgun sequence 1,094
NZ_JAIOUP010000040.1 Schnuerera sp. xch1 NODE_42_length_946_cov_1501.079402, whole genome shotgun sequence 946
NZ_JAIOUP010000041.1 Schnuerera sp. xch1 NODE_43_length_920_cov_9.811388, whole genome shotgun sequence 920
NZ_JAIOUP010000042.1 Schnuerera sp. xch1 NODE_46_length_730_cov_622.514548, whole genome shotgun sequence 730
NZ_JAIOUP010000043.1 Schnuerera sp. xch1 NODE_47_length_723_cov_384.461300, whole genome shotgun sequence 723
NZ_JAIOUP010000044.1 Schnuerera sp. xch1 NODE_48_length_614_cov_1283.832402, whole genome shotgun sequence 614
NZ_JAIOUP010000045.1 Schnuerera sp. xch1 NODE_49_length_540_cov_549.384449, whole genome shotgun sequence 540

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory