fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAHTBL01 sp020177595 MH4019

Genome identifier: GCF_020177595.1

NCBI assembly name: ASM2017759v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, JAHTBL01, JAHTBL01 sp020177595

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Cognatishimia

Scaffolds: 25

Genes: 3,661 Protein-coding: 3,556 RNAs: 49 pseudogenes: 56

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAHTBL010000001.1 Cognatishimia sp. MH4019 contig1, whole genome shotgun sequence 628,636
NZ_JAHTBL010000002.1 Cognatishimia sp. MH4019 contig2, whole genome shotgun sequence 581,192
NZ_JAHTBL010000003.1 Cognatishimia sp. MH4019 contig3, whole genome shotgun sequence 394,892
NZ_JAHTBL010000004.1 Cognatishimia sp. MH4019 contig4, whole genome shotgun sequence 362,036
NZ_JAHTBL010000005.1 Cognatishimia sp. MH4019 contig5, whole genome shotgun sequence 302,607
NZ_JAHTBL010000006.1 Cognatishimia sp. MH4019 contig6, whole genome shotgun sequence 220,535
NZ_JAHTBL010000007.1 Cognatishimia sp. MH4019 contig7, whole genome shotgun sequence 205,876
NZ_JAHTBL010000008.1 Cognatishimia sp. MH4019 contig8, whole genome shotgun sequence 185,042
NZ_JAHTBL010000009.1 Cognatishimia sp. MH4019 contig9, whole genome shotgun sequence 161,946
NZ_JAHTBL010000010.1 Cognatishimia sp. MH4019 contig10, whole genome shotgun sequence 153,066
NZ_JAHTBL010000011.1 Cognatishimia sp. MH4019 contig11, whole genome shotgun sequence 99,907
NZ_JAHTBL010000012.1 Cognatishimia sp. MH4019 contig12, whole genome shotgun sequence 98,695
NZ_JAHTBL010000013.1 Cognatishimia sp. MH4019 contig13, whole genome shotgun sequence 54,854
NZ_JAHTBL010000014.1 Cognatishimia sp. MH4019 contig14, whole genome shotgun sequence 50,906
NZ_JAHTBL010000015.1 Cognatishimia sp. MH4019 contig15, whole genome shotgun sequence 37,058
NZ_JAHTBL010000016.1 Cognatishimia sp. MH4019 contig16, whole genome shotgun sequence 35,649
NZ_JAHTBL010000017.1 Cognatishimia sp. MH4019 contig17, whole genome shotgun sequence 14,695
NZ_JAHTBL010000018.1 Cognatishimia sp. MH4019 contig18, whole genome shotgun sequence 9,395
NZ_JAHTBL010000019.1 Cognatishimia sp. MH4019 contig19, whole genome shotgun sequence 8,813
NZ_JAHTBL010000020.1 Cognatishimia sp. MH4019 contig20, whole genome shotgun sequence 7,886
NZ_JAHTBL010000021.1 Cognatishimia sp. MH4019 contig21, whole genome shotgun sequence 6,628
NZ_JAHTBL010000022.1 Cognatishimia sp. MH4019 contig22, whole genome shotgun sequence 3,748
NZ_JAHTBL010000023.1 Cognatishimia sp. MH4019 contig23, whole genome shotgun sequence 1,519
NZ_JAHTBL010000024.1 Cognatishimia sp. MH4019 contig24, whole genome shotgun sequence 1,511
NZ_JAHTBL010000025.1 Cognatishimia sp. MH4019 contig25, whole genome shotgun sequence 1,315

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory