fast.genomicscompare 6,575 genera of bacteria & archaea

 

Tamlana_B sargassicola 62-3

Genome identifier: GCF_020523965.1

NCBI assembly name: ASM2052396v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Tamlana_B, Tamlana_B sargassicola

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Tamlana, Tamlana sargassicola

Scaffolds: 42

Genes: 3,144 Protein-coding: 3,081 RNAs: 56 pseudogenes: 7

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAJAPX010000001.1 Tamlana sargassicola strain 62-3 NODE_1_length_1101888_cov_51.393516, whole genome shotgun sequence 1,101,888
NZ_JAJAPX010000002.1 Tamlana sargassicola strain 62-3 NODE_2_length_774005_cov_50.307194, whole genome shotgun sequence 774,005
NZ_JAJAPX010000003.1 Tamlana sargassicola strain 62-3 NODE_3_length_527058_cov_46.055468, whole genome shotgun sequence 527,058
NZ_JAJAPX010000004.1 Tamlana sargassicola strain 62-3 NODE_4_length_385765_cov_49.066109, whole genome shotgun sequence 385,765
NZ_JAJAPX010000005.1 Tamlana sargassicola strain 62-3 NODE_5_length_342768_cov_47.830981, whole genome shotgun sequence 342,768
NZ_JAJAPX010000006.1 Tamlana sargassicola strain 62-3 NODE_6_length_321175_cov_47.302709, whole genome shotgun sequence 321,175
NZ_JAJAPX010000007.1 Tamlana sargassicola strain 62-3 NODE_7_length_77286_cov_50.997304, whole genome shotgun sequence 77,286
NZ_JAJAPX010000008.1 Tamlana sargassicola strain 62-3 NODE_8_length_44784_cov_50.846228, whole genome shotgun sequence 44,784
NZ_JAJAPX010000009.1 Tamlana sargassicola strain 62-3 NODE_9_length_12368_cov_53.738012, whole genome shotgun sequence 12,368
NZ_JAJAPX010000010.1 Tamlana sargassicola strain 62-3 NODE_10_length_5200_cov_52.057954, whole genome shotgun sequence 5,200
NZ_JAJAPX010000011.1 Tamlana sargassicola strain 62-3 NODE_11_length_4112_cov_51.262484, whole genome shotgun sequence 4,112
NZ_JAJAPX010000012.1 Tamlana sargassicola strain 62-3 NODE_12_length_2534_cov_93.870378, whole genome shotgun sequence 2,534
NZ_JAJAPX010000013.1 Tamlana sargassicola strain 62-3 NODE_13_length_1804_cov_90.071556, whole genome shotgun sequence 1,804
NZ_JAJAPX010000014.1 Tamlana sargassicola strain 62-3 NODE_14_length_1467_cov_52.791791, whole genome shotgun sequence 1,467
NZ_JAJAPX010000015.1 Tamlana sargassicola strain 62-3 NODE_15_length_1301_cov_150.372232, whole genome shotgun sequence 1,301
NZ_JAJAPX010000016.1 Tamlana sargassicola strain 62-3 NODE_16_length_914_cov_180.852605, whole genome shotgun sequence 914
NZ_JAJAPX010000017.1 Tamlana sargassicola strain 62-3 NODE_17_length_719_cov_101.902027, whole genome shotgun sequence 719
NZ_JAJAPX010000018.1 Tamlana sargassicola strain 62-3 NODE_18_length_559_cov_162.877315, whole genome shotgun sequence 559
NZ_JAJAPX010000019.1 Tamlana sargassicola strain 62-3 NODE_19_length_521_cov_61.751269, whole genome shotgun sequence 521
NZ_JAJAPX010000020.1 Tamlana sargassicola strain 62-3 NODE_20_length_488_cov_98.897507, whole genome shotgun sequence 488
NZ_JAJAPX010000021.1 Tamlana sargassicola strain 62-3 NODE_21_length_480_cov_1.878187, whole genome shotgun sequence 480
NZ_JAJAPX010000022.1 Tamlana sargassicola strain 62-3 NODE_22_length_455_cov_141.765244, whole genome shotgun sequence 455
NZ_JAJAPX010000023.1 Tamlana sargassicola strain 62-3 NODE_23_length_449_cov_95.965839, whole genome shotgun sequence 449
NZ_JAJAPX010000024.1 Tamlana sargassicola strain 62-3 NODE_24_length_382_cov_49.752941, whole genome shotgun sequence 382
NZ_JAJAPX010000025.1 Tamlana sargassicola strain 62-3 NODE_25_length_359_cov_0.974138, whole genome shotgun sequence 359
NZ_JAJAPX010000026.1 Tamlana sargassicola strain 62-3 NODE_26_length_310_cov_53.530055, whole genome shotgun sequence 310
NZ_JAJAPX010000027.1 Tamlana sargassicola strain 62-3 NODE_27_length_306_cov_9.581006, whole genome shotgun sequence 306
NZ_JAJAPX010000028.1 Tamlana sargassicola strain 62-3 NODE_28_length_303_cov_94.301136, whole genome shotgun sequence 303
NZ_JAJAPX010000029.1 Tamlana sargassicola strain 62-3 NODE_29_length_297_cov_10.447059, whole genome shotgun sequence 297
NZ_JAJAPX010000030.1 Tamlana sargassicola strain 62-3 NODE_30_length_293_cov_2.524096, whole genome shotgun sequence 293
NZ_JAJAPX010000031.1 Tamlana sargassicola strain 62-3 NODE_31_length_289_cov_3.882716, whole genome shotgun sequence 289
NZ_JAJAPX010000032.1 Tamlana sargassicola strain 62-3 NODE_32_length_283_cov_1.179487, whole genome shotgun sequence 283
NZ_JAJAPX010000033.1 Tamlana sargassicola strain 62-3 NODE_33_length_283_cov_0.884615, whole genome shotgun sequence 283
NZ_JAJAPX010000034.1 Tamlana sargassicola strain 62-3 NODE_34_length_281_cov_53.909091, whole genome shotgun sequence 281
NZ_JAJAPX010000035.1 Tamlana sargassicola strain 62-3 NODE_35_length_255_cov_79.257812, whole genome shotgun sequence 255
NZ_JAJAPX010000036.1 Tamlana sargassicola strain 62-3 NODE_36_length_255_cov_47.593750, whole genome shotgun sequence 255
NZ_JAJAPX010000037.1 Tamlana sargassicola strain 62-3 NODE_37_length_255_cov_47.125000, whole genome shotgun sequence 255
NZ_JAJAPX010000038.1 Tamlana sargassicola strain 62-3 NODE_38_length_255_cov_46.781250, whole genome shotgun sequence 255
NZ_JAJAPX010000039.1 Tamlana sargassicola strain 62-3 NODE_39_length_255_cov_36.875000, whole genome shotgun sequence 255
NZ_JAJAPX010000040.1 Tamlana sargassicola strain 62-3 NODE_40_length_245_cov_49.338983, whole genome shotgun sequence 245
NZ_JAJAPX010000041.1 Tamlana sargassicola strain 62-3 NODE_41_length_219_cov_45.847826, whole genome shotgun sequence 219
NZ_JAJAPX010000042.1 Tamlana sargassicola strain 62-3 NODE_42_length_217_cov_137.466667, whole genome shotgun sequence 217

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory