fast.genomicscompare 6,575 genera of bacteria & archaea

 

Andeanibacterium sp020539485 CC-YST694

Genome identifier: GCF_020539485.1

NCBI assembly name: ASM2053948v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Andeanibacterium, Andeanibacterium sp020539485

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Erythrobacteraceae, Altererythrobacter

Scaffolds: 13

Genes: 3,114 Protein-coding: 3,050 RNAs: 53 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACDXU010000001.1 Altererythrobacter sp. CC-YST694 contig01, whole genome shotgun sequence 1,697,765
NZ_JACDXU010000002.1 Altererythrobacter sp. CC-YST694 contig02, whole genome shotgun sequence 852,023
NZ_JACDXU010000003.1 Altererythrobacter sp. CC-YST694 contig03, whole genome shotgun sequence 453,539
NZ_JACDXU010000004.1 Altererythrobacter sp. CC-YST694 contig04, whole genome shotgun sequence 75,557
NZ_JACDXU010000005.1 Altererythrobacter sp. CC-YST694 contig05, whole genome shotgun sequence 73,950
NZ_JACDXU010000006.1 Altererythrobacter sp. CC-YST694 contig06, whole genome shotgun sequence 40,743
NZ_JACDXU010000007.1 Altererythrobacter sp. CC-YST694 contig07, whole genome shotgun sequence 39,507
NZ_JACDXU010000008.1 Altererythrobacter sp. CC-YST694 contig08, whole genome shotgun sequence 22,523
NZ_JACDXU010000009.1 Altererythrobacter sp. CC-YST694 contig09, whole genome shotgun sequence 6,636
NZ_JACDXU010000010.1 Altererythrobacter sp. CC-YST694 contig10, whole genome shotgun sequence 5,771
NZ_JACDXU010000011.1 Altererythrobacter sp. CC-YST694 contig12, whole genome shotgun sequence 1,402
NZ_JACDXU010000012.1 Altererythrobacter sp. CC-YST694 contig13, whole genome shotgun sequence 1,173
NZ_JACDXU010000013.1 Altererythrobacter sp. CC-YST694 contig14, whole genome shotgun sequence 469

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory