fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAFMPQ01 sp020667845 F0-27

Genome identifier: GCF_020667845.1

NCBI assembly name: ASM2066784v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, JAFMPQ01, JAFMPQ01 sp020667845

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Cognatishimia

Scaffolds: 134

Genes: 4,326 Protein-coding: 4,122 RNAs: 51 pseudogenes: 153

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAFMPQ010000001.1 Cognatishimia sp. F0-27 scaffold_1_length=262879, whole genome shotgun sequence 262,878
NZ_JAFMPQ010000002.1 Cognatishimia sp. F0-27 scaffold_2_length=262159, whole genome shotgun sequence 262,158
NZ_JAFMPQ010000003.1 Cognatishimia sp. F0-27 scaffold_3_length=259863, whole genome shotgun sequence 259,862
NZ_JAFMPQ010000004.1 Cognatishimia sp. F0-27 scaffold_4_length=169832, whole genome shotgun sequence 169,831
NZ_JAFMPQ010000005.1 Cognatishimia sp. F0-27 scaffold_5_length=140108, whole genome shotgun sequence 140,107
NZ_JAFMPQ010000006.1 Cognatishimia sp. F0-27 scaffold_6_length=136977, whole genome shotgun sequence 136,976
NZ_JAFMPQ010000007.1 Cognatishimia sp. F0-27 scaffold_7_length=134302, whole genome shotgun sequence 134,301
NZ_JAFMPQ010000008.1 Cognatishimia sp. F0-27 scaffold_8_length=128433, whole genome shotgun sequence 128,432
NZ_JAFMPQ010000009.1 Cognatishimia sp. F0-27 scaffold_9_length=128004, whole genome shotgun sequence 128,003
NZ_JAFMPQ010000010.1 Cognatishimia sp. F0-27 scaffold_10_length=127861, whole genome shotgun sequence 127,860
NZ_JAFMPQ010000011.1 Cognatishimia sp. F0-27 scaffold_11_length=119155, whole genome shotgun sequence 119,154
NZ_JAFMPQ010000012.1 Cognatishimia sp. F0-27 scaffold_12_length=116999, whole genome shotgun sequence 116,998
NZ_JAFMPQ010000013.1 Cognatishimia sp. F0-27 scaffold_13_length=111952, whole genome shotgun sequence 111,951
NZ_JAFMPQ010000014.1 Cognatishimia sp. F0-27 scaffold_14_length=109321, whole genome shotgun sequence 109,320
NZ_JAFMPQ010000015.1 Cognatishimia sp. F0-27 scaffold_15_length=104700, whole genome shotgun sequence 104,699
NZ_JAFMPQ010000016.1 Cognatishimia sp. F0-27 scaffold_16_length=101165, whole genome shotgun sequence 101,164
NZ_JAFMPQ010000017.1 Cognatishimia sp. F0-27 scaffold_17_length=99733, whole genome shotgun sequence 99,732
NZ_JAFMPQ010000018.1 Cognatishimia sp. F0-27 scaffold_18_length=99082, whole genome shotgun sequence 99,081
NZ_JAFMPQ010000019.1 Cognatishimia sp. F0-27 scaffold_19_length=96842, whole genome shotgun sequence 96,841
NZ_JAFMPQ010000020.1 Cognatishimia sp. F0-27 scaffold_20_length=95734, whole genome shotgun sequence 95,733
NZ_JAFMPQ010000021.1 Cognatishimia sp. F0-27 scaffold_21_length=94382, whole genome shotgun sequence 94,381
NZ_JAFMPQ010000022.1 Cognatishimia sp. F0-27 scaffold_22_length=92092, whole genome shotgun sequence 92,091
NZ_JAFMPQ010000023.1 Cognatishimia sp. F0-27 scaffold_23_length=78828, whole genome shotgun sequence 78,827
NZ_JAFMPQ010000024.1 Cognatishimia sp. F0-27 scaffold_24_length=78040, whole genome shotgun sequence 78,039
NZ_JAFMPQ010000025.1 Cognatishimia sp. F0-27 scaffold_25_length=73434, whole genome shotgun sequence 73,433
NZ_JAFMPQ010000026.1 Cognatishimia sp. F0-27 scaffold_26_length=72606, whole genome shotgun sequence 72,605
NZ_JAFMPQ010000027.1 Cognatishimia sp. F0-27 scaffold_27_length=72079, whole genome shotgun sequence 72,078
NZ_JAFMPQ010000028.1 Cognatishimia sp. F0-27 scaffold_28_length=70696, whole genome shotgun sequence 70,695
NZ_JAFMPQ010000029.1 Cognatishimia sp. F0-27 scaffold_29_length=69155, whole genome shotgun sequence 69,154
NZ_JAFMPQ010000030.1 Cognatishimia sp. F0-27 scaffold_30_length=68224, whole genome shotgun sequence 68,223
NZ_JAFMPQ010000031.1 Cognatishimia sp. F0-27 scaffold_31_length=65228, whole genome shotgun sequence 65,227
NZ_JAFMPQ010000032.1 Cognatishimia sp. F0-27 scaffold_32_length=60583, whole genome shotgun sequence 60,582
NZ_JAFMPQ010000033.1 Cognatishimia sp. F0-27 scaffold_33_length=60130, whole genome shotgun sequence 60,129
NZ_JAFMPQ010000034.1 Cognatishimia sp. F0-27 scaffold_34_length=56249, whole genome shotgun sequence 56,248
NZ_JAFMPQ010000035.1 Cognatishimia sp. F0-27 scaffold_35_length=56047, whole genome shotgun sequence 56,046
NZ_JAFMPQ010000036.1 Cognatishimia sp. F0-27 scaffold_36_length=54439, whole genome shotgun sequence 54,438
NZ_JAFMPQ010000037.1 Cognatishimia sp. F0-27 scaffold_37_length=53153, whole genome shotgun sequence 53,152
NZ_JAFMPQ010000038.1 Cognatishimia sp. F0-27 scaffold_38_length=51612, whole genome shotgun sequence 51,611
NZ_JAFMPQ010000039.1 Cognatishimia sp. F0-27 scaffold_39_length=51274, whole genome shotgun sequence 51,273
NZ_JAFMPQ010000040.1 Cognatishimia sp. F0-27 scaffold_40_length=44513, whole genome shotgun sequence 44,512
NZ_JAFMPQ010000041.1 Cognatishimia sp. F0-27 scaffold_41_length=42592, whole genome shotgun sequence 42,591
NZ_JAFMPQ010000042.1 Cognatishimia sp. F0-27 scaffold_42_length=37170, whole genome shotgun sequence 37,169
NZ_JAFMPQ010000043.1 Cognatishimia sp. F0-27 scaffold_43_length=36392, whole genome shotgun sequence 36,391
NZ_JAFMPQ010000044.1 Cognatishimia sp. F0-27 scaffold_44_length=35721, whole genome shotgun sequence 35,720
NZ_JAFMPQ010000045.1 Cognatishimia sp. F0-27 scaffold_45_length=35398, whole genome shotgun sequence 35,397
NZ_JAFMPQ010000046.1 Cognatishimia sp. F0-27 scaffold_46_length=34979, whole genome shotgun sequence 34,978
NZ_JAFMPQ010000047.1 Cognatishimia sp. F0-27 scaffold_47_length=34478, whole genome shotgun sequence 34,477
NZ_JAFMPQ010000048.1 Cognatishimia sp. F0-27 scaffold_48_length=33038, whole genome shotgun sequence 33,037
NZ_JAFMPQ010000049.1 Cognatishimia sp. F0-27 scaffold_49_length=32172, whole genome shotgun sequence 32,171
NZ_JAFMPQ010000050.1 Cognatishimia sp. F0-27 scaffold_50_length=31764, whole genome shotgun sequence 31,763
NZ_JAFMPQ010000051.1 Cognatishimia sp. F0-27 scaffold_51_length=30732, whole genome shotgun sequence 30,731
NZ_JAFMPQ010000052.1 Cognatishimia sp. F0-27 scaffold_52_length=27544, whole genome shotgun sequence 27,543
NZ_JAFMPQ010000053.1 Cognatishimia sp. F0-27 scaffold_53_length=26904, whole genome shotgun sequence 26,903
NZ_JAFMPQ010000054.1 Cognatishimia sp. F0-27 scaffold_54_length=25939, whole genome shotgun sequence 25,938
NZ_JAFMPQ010000055.1 Cognatishimia sp. F0-27 scaffold_55_length=25727, whole genome shotgun sequence 25,726
NZ_JAFMPQ010000056.1 Cognatishimia sp. F0-27 scaffold_56_length=23784, whole genome shotgun sequence 23,783
NZ_JAFMPQ010000057.1 Cognatishimia sp. F0-27 scaffold_57_length=22956, whole genome shotgun sequence 22,955
NZ_JAFMPQ010000058.1 Cognatishimia sp. F0-27 scaffold_58_length=22509, whole genome shotgun sequence 22,508
NZ_JAFMPQ010000059.1 Cognatishimia sp. F0-27 scaffold_59_length=19341, whole genome shotgun sequence 19,340
NZ_JAFMPQ010000060.1 Cognatishimia sp. F0-27 scaffold_60_length=15192, whole genome shotgun sequence 15,191
NZ_JAFMPQ010000061.1 Cognatishimia sp. F0-27 scaffold_61_length=15089, whole genome shotgun sequence 15,088
NZ_JAFMPQ010000062.1 Cognatishimia sp. F0-27 scaffold_62_length=13626, whole genome shotgun sequence 13,625
NZ_JAFMPQ010000063.1 Cognatishimia sp. F0-27 scaffold_63_length=10003, whole genome shotgun sequence 10,002
NZ_JAFMPQ010000064.1 Cognatishimia sp. F0-27 scaffold_64_length=9911, whole genome shotgun sequence 9,910
NZ_JAFMPQ010000065.1 Cognatishimia sp. F0-27 scaffold_65_length=8765, whole genome shotgun sequence 8,764
NZ_JAFMPQ010000066.1 Cognatishimia sp. F0-27 scaffold_66_length=8622, whole genome shotgun sequence 8,621
NZ_JAFMPQ010000067.1 Cognatishimia sp. F0-27 scaffold_67_length=8345, whole genome shotgun sequence 8,344
NZ_JAFMPQ010000068.1 Cognatishimia sp. F0-27 scaffold_68_length=7233, whole genome shotgun sequence 7,232
NZ_JAFMPQ010000069.1 Cognatishimia sp. F0-27 scaffold_69_length=6756, whole genome shotgun sequence 6,755
NZ_JAFMPQ010000070.1 Cognatishimia sp. F0-27 scaffold_70_length=6366, whole genome shotgun sequence 6,365
NZ_JAFMPQ010000071.1 Cognatishimia sp. F0-27 scaffold_71_length=6182, whole genome shotgun sequence 6,181
NZ_JAFMPQ010000072.1 Cognatishimia sp. F0-27 scaffold_72_length=4993, whole genome shotgun sequence 4,992
NZ_JAFMPQ010000073.1 Cognatishimia sp. F0-27 scaffold_73_length=4881, whole genome shotgun sequence 4,880
NZ_JAFMPQ010000074.1 Cognatishimia sp. F0-27 scaffold_74_length=4761, whole genome shotgun sequence 4,760
NZ_JAFMPQ010000075.1 Cognatishimia sp. F0-27 scaffold_75_length=4634, whole genome shotgun sequence 4,633
NZ_JAFMPQ010000076.1 Cognatishimia sp. F0-27 scaffold_76_length=3813, whole genome shotgun sequence 3,812
NZ_JAFMPQ010000077.1 Cognatishimia sp. F0-27 scaffold_77_length=2875, whole genome shotgun sequence 2,874
NZ_JAFMPQ010000078.1 Cognatishimia sp. F0-27 scaffold_78_length=2615, whole genome shotgun sequence 2,614
NZ_JAFMPQ010000079.1 Cognatishimia sp. F0-27 scaffold_79_length=2487, whole genome shotgun sequence 2,486
NZ_JAFMPQ010000080.1 Cognatishimia sp. F0-27 scaffold_80_length=2135, whole genome shotgun sequence 2,134
NZ_JAFMPQ010000081.1 Cognatishimia sp. F0-27 scaffold_81_length=2080, whole genome shotgun sequence 2,079
NZ_JAFMPQ010000082.1 Cognatishimia sp. F0-27 scaffold_82_length=1809, whole genome shotgun sequence 1,808
NZ_JAFMPQ010000083.1 Cognatishimia sp. F0-27 scaffold_83_length=1768, whole genome shotgun sequence 1,767
NZ_JAFMPQ010000084.1 Cognatishimia sp. F0-27 scaffold_84_length=1495, whole genome shotgun sequence 1,494
NZ_JAFMPQ010000085.1 Cognatishimia sp. F0-27 scaffold_85_length=1403, whole genome shotgun sequence 1,402
NZ_JAFMPQ010000086.1 Cognatishimia sp. F0-27 scaffold_86_length=1285, whole genome shotgun sequence 1,284
NZ_JAFMPQ010000087.1 Cognatishimia sp. F0-27 scaffold_87_length=1265, whole genome shotgun sequence 1,264
NZ_JAFMPQ010000088.1 Cognatishimia sp. F0-27 scaffold_88_length=1193, whole genome shotgun sequence 1,192
NZ_JAFMPQ010000089.1 Cognatishimia sp. F0-27 scaffold_89_length=1193, whole genome shotgun sequence 1,192
NZ_JAFMPQ010000090.1 Cognatishimia sp. F0-27 scaffold_90_length=1171, whole genome shotgun sequence 1,170
NZ_JAFMPQ010000091.1 Cognatishimia sp. F0-27 scaffold_91_length=982, whole genome shotgun sequence 981
NZ_JAFMPQ010000092.1 Cognatishimia sp. F0-27 scaffold_92_length=936, whole genome shotgun sequence 935
NZ_JAFMPQ010000093.1 Cognatishimia sp. F0-27 scaffold_93_length=932, whole genome shotgun sequence 931
NZ_JAFMPQ010000094.1 Cognatishimia sp. F0-27 scaffold_94_length=911, whole genome shotgun sequence 910
NZ_JAFMPQ010000095.1 Cognatishimia sp. F0-27 scaffold_95_length=857, whole genome shotgun sequence 856
NZ_JAFMPQ010000096.1 Cognatishimia sp. F0-27 scaffold_96_length=853, whole genome shotgun sequence 852
NZ_JAFMPQ010000097.1 Cognatishimia sp. F0-27 scaffold_97_length=821, whole genome shotgun sequence 820
NZ_JAFMPQ010000098.1 Cognatishimia sp. F0-27 scaffold_98_length=821, whole genome shotgun sequence 820
NZ_JAFMPQ010000099.1 Cognatishimia sp. F0-27 scaffold_99_length=806, whole genome shotgun sequence 805
NZ_JAFMPQ010000100.1 Cognatishimia sp. F0-27 scaffold_100_length=778, whole genome shotgun sequence 777
NZ_JAFMPQ010000101.1 Cognatishimia sp. F0-27 scaffold_101_length=736, whole genome shotgun sequence 735
NZ_JAFMPQ010000102.1 Cognatishimia sp. F0-27 scaffold_102_length=696, whole genome shotgun sequence 695
NZ_JAFMPQ010000103.1 Cognatishimia sp. F0-27 scaffold_103_length=696, whole genome shotgun sequence 695
NZ_JAFMPQ010000104.1 Cognatishimia sp. F0-27 scaffold_104_length=696, whole genome shotgun sequence 695
NZ_JAFMPQ010000105.1 Cognatishimia sp. F0-27 scaffold_105_length=576, whole genome shotgun sequence 575
NZ_JAFMPQ010000106.1 Cognatishimia sp. F0-27 scaffold_106_length=539, whole genome shotgun sequence 538
NZ_JAFMPQ010000107.1 Cognatishimia sp. F0-27 scaffold_107_length=525, whole genome shotgun sequence 524
NZ_JAFMPQ010000108.1 Cognatishimia sp. F0-27 scaffold_108_length=509, whole genome shotgun sequence 508
NZ_JAFMPQ010000109.1 Cognatishimia sp. F0-27 scaffold_109_length=492, whole genome shotgun sequence 491
NZ_JAFMPQ010000110.1 Cognatishimia sp. F0-27 scaffold_110_length=446, whole genome shotgun sequence 445
NZ_JAFMPQ010000111.1 Cognatishimia sp. F0-27 scaffold_111_length=445, whole genome shotgun sequence 444
NZ_JAFMPQ010000112.1 Cognatishimia sp. F0-27 scaffold_112_length=439, whole genome shotgun sequence 438
NZ_JAFMPQ010000113.1 Cognatishimia sp. F0-27 scaffold_113_length=436, whole genome shotgun sequence 435
NZ_JAFMPQ010000114.1 Cognatishimia sp. F0-27 scaffold_114_length=436, whole genome shotgun sequence 435
NZ_JAFMPQ010000115.1 Cognatishimia sp. F0-27 scaffold_115_length=423, whole genome shotgun sequence 422
NZ_JAFMPQ010000116.1 Cognatishimia sp. F0-27 scaffold_116_length=417, whole genome shotgun sequence 416
NZ_JAFMPQ010000117.1 Cognatishimia sp. F0-27 scaffold_117_length=411, whole genome shotgun sequence 410
NZ_JAFMPQ010000118.1 Cognatishimia sp. F0-27 scaffold_118_length=394, whole genome shotgun sequence 393
NZ_JAFMPQ010000119.1 Cognatishimia sp. F0-27 scaffold_119_length=393, whole genome shotgun sequence 392
NZ_JAFMPQ010000120.1 Cognatishimia sp. F0-27 scaffold_120_length=393, whole genome shotgun sequence 392
NZ_JAFMPQ010000121.1 Cognatishimia sp. F0-27 scaffold_121_length=392, whole genome shotgun sequence 391
NZ_JAFMPQ010000122.1 Cognatishimia sp. F0-27 scaffold_122_length=390, whole genome shotgun sequence 389
NZ_JAFMPQ010000123.1 Cognatishimia sp. F0-27 scaffold_123_length=362, whole genome shotgun sequence 361
NZ_JAFMPQ010000124.1 Cognatishimia sp. F0-27 scaffold_124_length=359, whole genome shotgun sequence 358
NZ_JAFMPQ010000125.1 Cognatishimia sp. F0-27 scaffold_125_length=357, whole genome shotgun sequence 356
NZ_JAFMPQ010000126.1 Cognatishimia sp. F0-27 scaffold_126_length=343, whole genome shotgun sequence 342
NZ_JAFMPQ010000127.1 Cognatishimia sp. F0-27 scaffold_127_length=332, whole genome shotgun sequence 331
NZ_JAFMPQ010000128.1 Cognatishimia sp. F0-27 scaffold_128_length=327, whole genome shotgun sequence 326
NZ_JAFMPQ010000129.1 Cognatishimia sp. F0-27 scaffold_129_length=324, whole genome shotgun sequence 323
NZ_JAFMPQ010000130.1 Cognatishimia sp. F0-27 scaffold_130_length=321, whole genome shotgun sequence 320
NZ_JAFMPQ010000131.1 Cognatishimia sp. F0-27 scaffold_131_length=318, whole genome shotgun sequence 317
NZ_JAFMPQ010000132.1 Cognatishimia sp. F0-27 scaffold_132_length=303, whole genome shotgun sequence 302
NZ_JAFMPQ010000133.1 Cognatishimia sp. F0-27 scaffold_133_length=301, whole genome shotgun sequence 300
NZ_JAFMPQ010000134.1 Cognatishimia sp. F0-27 scaffold_134_length=301, whole genome shotgun sequence 300

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory