fast.genomicscompare 6,575 genera of bacteria & archaea

 

Ruminococcus_C sp000437175 MSK.21.81

Genome identifier: GCF_020709055.1

NCBI assembly name: ASM2070905v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, Ruminococcus_C, Ruminococcus_C sp000437175

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Ruminococcus, Ruminococcus callidus

Scaffolds: 157

Genes: 2,851 Protein-coding: 2,737 RNAs: 63 pseudogenes: 51

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAJFCK010000001.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_1, whole genome shotgun sequence 190,636
NZ_JAJFCK010000002.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_2, whole genome shotgun sequence 147,469
NZ_JAJFCK010000003.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_3, whole genome shotgun sequence 111,770
NZ_JAJFCK010000004.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_4, whole genome shotgun sequence 108,747
NZ_JAJFCK010000005.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_5, whole genome shotgun sequence 106,291
NZ_JAJFCK010000006.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_6, whole genome shotgun sequence 102,469
NZ_JAJFCK010000007.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_7, whole genome shotgun sequence 95,854
NZ_JAJFCK010000008.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_8, whole genome shotgun sequence 92,896
NZ_JAJFCK010000009.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_9, whole genome shotgun sequence 88,679
NZ_JAJFCK010000010.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_10, whole genome shotgun sequence 87,602
NZ_JAJFCK010000011.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_11, whole genome shotgun sequence 87,549
NZ_JAJFCK010000012.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_12, whole genome shotgun sequence 81,502
NZ_JAJFCK010000013.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_13, whole genome shotgun sequence 80,052
NZ_JAJFCK010000014.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_14, whole genome shotgun sequence 73,910
NZ_JAJFCK010000015.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_15, whole genome shotgun sequence 65,580
NZ_JAJFCK010000016.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_16, whole genome shotgun sequence 62,894
NZ_JAJFCK010000017.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_17, whole genome shotgun sequence 62,387
NZ_JAJFCK010000018.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_18, whole genome shotgun sequence 59,503
NZ_JAJFCK010000019.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_19, whole genome shotgun sequence 58,602
NZ_JAJFCK010000020.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_20, whole genome shotgun sequence 55,445
NZ_JAJFCK010000021.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_21, whole genome shotgun sequence 44,281
NZ_JAJFCK010000022.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_22, whole genome shotgun sequence 35,535
NZ_JAJFCK010000023.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_23, whole genome shotgun sequence 35,384
NZ_JAJFCK010000024.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_24, whole genome shotgun sequence 34,924
NZ_JAJFCK010000025.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_25, whole genome shotgun sequence 34,905
NZ_JAJFCK010000026.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_26, whole genome shotgun sequence 34,011
NZ_JAJFCK010000027.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_27, whole genome shotgun sequence 33,624
NZ_JAJFCK010000028.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_28, whole genome shotgun sequence 32,161
NZ_JAJFCK010000029.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_29, whole genome shotgun sequence 31,113
NZ_JAJFCK010000030.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_30, whole genome shotgun sequence 29,220
NZ_JAJFCK010000031.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_31, whole genome shotgun sequence 28,705
NZ_JAJFCK010000032.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_32, whole genome shotgun sequence 28,329
NZ_JAJFCK010000033.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_33, whole genome shotgun sequence 27,547
NZ_JAJFCK010000034.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_34, whole genome shotgun sequence 27,047
NZ_JAJFCK010000035.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_35, whole genome shotgun sequence 25,380
NZ_JAJFCK010000036.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_36, whole genome shotgun sequence 25,172
NZ_JAJFCK010000037.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_37, whole genome shotgun sequence 24,822
NZ_JAJFCK010000038.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_38, whole genome shotgun sequence 24,509
NZ_JAJFCK010000039.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_39, whole genome shotgun sequence 21,765
NZ_JAJFCK010000040.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_40, whole genome shotgun sequence 21,308
NZ_JAJFCK010000041.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_41, whole genome shotgun sequence 21,099
NZ_JAJFCK010000042.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_42, whole genome shotgun sequence 19,805
NZ_JAJFCK010000043.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_43, whole genome shotgun sequence 17,940
NZ_JAJFCK010000044.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_44, whole genome shotgun sequence 17,280
NZ_JAJFCK010000045.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_45, whole genome shotgun sequence 15,999
NZ_JAJFCK010000046.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_46, whole genome shotgun sequence 14,816
NZ_JAJFCK010000047.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_47, whole genome shotgun sequence 14,635
NZ_JAJFCK010000048.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_48, whole genome shotgun sequence 14,226
NZ_JAJFCK010000049.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_49, whole genome shotgun sequence 14,075
NZ_JAJFCK010000050.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_50, whole genome shotgun sequence 13,759
NZ_JAJFCK010000051.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_51, whole genome shotgun sequence 13,460
NZ_JAJFCK010000052.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_52, whole genome shotgun sequence 13,430
NZ_JAJFCK010000053.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_53, whole genome shotgun sequence 13,252
NZ_JAJFCK010000054.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_54, whole genome shotgun sequence 13,178
NZ_JAJFCK010000055.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_55, whole genome shotgun sequence 12,860
NZ_JAJFCK010000056.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_56, whole genome shotgun sequence 12,336
NZ_JAJFCK010000057.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_57, whole genome shotgun sequence 12,087
NZ_JAJFCK010000058.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_58, whole genome shotgun sequence 11,264
NZ_JAJFCK010000059.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_59, whole genome shotgun sequence 10,830
NZ_JAJFCK010000060.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_60, whole genome shotgun sequence 10,650
NZ_JAJFCK010000061.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_61, whole genome shotgun sequence 10,342
NZ_JAJFCK010000062.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_62, whole genome shotgun sequence 10,225
NZ_JAJFCK010000063.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_63, whole genome shotgun sequence 10,105
NZ_JAJFCK010000064.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_64, whole genome shotgun sequence 8,938
NZ_JAJFCK010000065.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_65, whole genome shotgun sequence 8,642
NZ_JAJFCK010000066.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_66, whole genome shotgun sequence 8,626
NZ_JAJFCK010000067.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_67, whole genome shotgun sequence 8,240
NZ_JAJFCK010000068.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_68, whole genome shotgun sequence 7,962
NZ_JAJFCK010000069.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_69, whole genome shotgun sequence 7,758
NZ_JAJFCK010000070.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_70, whole genome shotgun sequence 7,228
NZ_JAJFCK010000071.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_71, whole genome shotgun sequence 6,503
NZ_JAJFCK010000072.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_72, whole genome shotgun sequence 6,459
NZ_JAJFCK010000073.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_73, whole genome shotgun sequence 6,334
NZ_JAJFCK010000074.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_74, whole genome shotgun sequence 6,043
NZ_JAJFCK010000075.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_75, whole genome shotgun sequence 5,950
NZ_JAJFCK010000076.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_76, whole genome shotgun sequence 5,758
NZ_JAJFCK010000077.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_77, whole genome shotgun sequence 5,410
NZ_JAJFCK010000078.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_78, whole genome shotgun sequence 5,290
NZ_JAJFCK010000079.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_79, whole genome shotgun sequence 4,991
NZ_JAJFCK010000080.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_80, whole genome shotgun sequence 4,912
NZ_JAJFCK010000081.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_81, whole genome shotgun sequence 4,735
NZ_JAJFCK010000082.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_82, whole genome shotgun sequence 4,672
NZ_JAJFCK010000083.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_83, whole genome shotgun sequence 4,517
NZ_JAJFCK010000084.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_84, whole genome shotgun sequence 4,433
NZ_JAJFCK010000085.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_85, whole genome shotgun sequence 4,372
NZ_JAJFCK010000086.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_86, whole genome shotgun sequence 4,114
NZ_JAJFCK010000087.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_87, whole genome shotgun sequence 3,965
NZ_JAJFCK010000088.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_88, whole genome shotgun sequence 3,854
NZ_JAJFCK010000089.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_89, whole genome shotgun sequence 3,451
NZ_JAJFCK010000090.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_90, whole genome shotgun sequence 3,332
NZ_JAJFCK010000091.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_91, whole genome shotgun sequence 3,242
NZ_JAJFCK010000092.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_92, whole genome shotgun sequence 3,226
NZ_JAJFCK010000093.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_93, whole genome shotgun sequence 3,087
NZ_JAJFCK010000094.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_94, whole genome shotgun sequence 2,942
NZ_JAJFCK010000095.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_95, whole genome shotgun sequence 2,807
NZ_JAJFCK010000096.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_96, whole genome shotgun sequence 2,624
NZ_JAJFCK010000097.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_97, whole genome shotgun sequence 2,567
NZ_JAJFCK010000098.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_98, whole genome shotgun sequence 2,499
NZ_JAJFCK010000099.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_99, whole genome shotgun sequence 2,480
NZ_JAJFCK010000100.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_100, whole genome shotgun sequence 2,455
NZ_JAJFCK010000101.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_101, whole genome shotgun sequence 2,329
NZ_JAJFCK010000102.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_102, whole genome shotgun sequence 2,217
NZ_JAJFCK010000103.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_103, whole genome shotgun sequence 2,198
NZ_JAJFCK010000104.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_104, whole genome shotgun sequence 2,157
NZ_JAJFCK010000105.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_105, whole genome shotgun sequence 2,147
NZ_JAJFCK010000106.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_106, whole genome shotgun sequence 2,144
NZ_JAJFCK010000107.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_107, whole genome shotgun sequence 2,096
NZ_JAJFCK010000108.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_108, whole genome shotgun sequence 1,995
NZ_JAJFCK010000109.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_109, whole genome shotgun sequence 1,856
NZ_JAJFCK010000110.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_110, whole genome shotgun sequence 1,825
NZ_JAJFCK010000111.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_111, whole genome shotgun sequence 1,805
NZ_JAJFCK010000112.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_112, whole genome shotgun sequence 1,716
NZ_JAJFCK010000113.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_113, whole genome shotgun sequence 1,601
NZ_JAJFCK010000114.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_114, whole genome shotgun sequence 1,494
NZ_JAJFCK010000115.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_115, whole genome shotgun sequence 1,477
NZ_JAJFCK010000116.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_116, whole genome shotgun sequence 1,372
NZ_JAJFCK010000117.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_117, whole genome shotgun sequence 1,334
NZ_JAJFCK010000118.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_118, whole genome shotgun sequence 1,266
NZ_JAJFCK010000119.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_119, whole genome shotgun sequence 1,174
NZ_JAJFCK010000120.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_120, whole genome shotgun sequence 995
NZ_JAJFCK010000121.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_121, whole genome shotgun sequence 907
NZ_JAJFCK010000122.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_122, whole genome shotgun sequence 878
NZ_JAJFCK010000123.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_123, whole genome shotgun sequence 859
NZ_JAJFCK010000124.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_124, whole genome shotgun sequence 854
NZ_JAJFCK010000125.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_125, whole genome shotgun sequence 734
NZ_JAJFCK010000126.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_126, whole genome shotgun sequence 852
NZ_JAJFCK010000127.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_127, whole genome shotgun sequence 844
NZ_JAJFCK010000128.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_128, whole genome shotgun sequence 842
NZ_JAJFCK010000129.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_129, whole genome shotgun sequence 730
NZ_JAJFCK010000130.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_130, whole genome shotgun sequence 710
NZ_JAJFCK010000131.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_131, whole genome shotgun sequence 683
NZ_JAJFCK010000132.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_132, whole genome shotgun sequence 640
NZ_JAJFCK010000133.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_133, whole genome shotgun sequence 635
NZ_JAJFCK010000134.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_134, whole genome shotgun sequence 624
NZ_JAJFCK010000135.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_135, whole genome shotgun sequence 621
NZ_JAJFCK010000136.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_136, whole genome shotgun sequence 593
NZ_JAJFCK010000137.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_137, whole genome shotgun sequence 559
NZ_JAJFCK010000138.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_138, whole genome shotgun sequence 554
NZ_JAJFCK010000139.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_139, whole genome shotgun sequence 534
NZ_JAJFCK010000140.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_140, whole genome shotgun sequence 515
NZ_JAJFCK010000141.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_141, whole genome shotgun sequence 503
NZ_JAJFCK010000142.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_142, whole genome shotgun sequence 470
NZ_JAJFCK010000143.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_143, whole genome shotgun sequence 463
NZ_JAJFCK010000144.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_144, whole genome shotgun sequence 451
NZ_JAJFCK010000145.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_145, whole genome shotgun sequence 444
NZ_JAJFCK010000146.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_146, whole genome shotgun sequence 423
NZ_JAJFCK010000147.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_147, whole genome shotgun sequence 422
NZ_JAJFCK010000148.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_148, whole genome shotgun sequence 382
NZ_JAJFCK010000149.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_149, whole genome shotgun sequence 367
NZ_JAJFCK010000150.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_150, whole genome shotgun sequence 360
NZ_JAJFCK010000151.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_151, whole genome shotgun sequence 344
NZ_JAJFCK010000152.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_152, whole genome shotgun sequence 344
NZ_JAJFCK010000153.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_153, whole genome shotgun sequence 338
NZ_JAJFCK010000154.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_154, whole genome shotgun sequence 338
NZ_JAJFCK010000155.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_155, whole genome shotgun sequence 334
NZ_JAJFCK010000156.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_156, whole genome shotgun sequence 326
NZ_JAJFCK010000157.1 Ruminococcus callidus strain MSK.21.81 EBJNMNME_157, whole genome shotgun sequence 303

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory